Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cca01g01060 | ATGGTTGTTGTCAGTAGCAAAAGCAGCACAAAACTTGTACAATCATCATGTTCGTGTCCACCTAGAATGGTTAAAGTTTCAGCTGAGGCTGCTTCTTCTTCTTCTtcttctttttcttccgctaaaaaacatgatgttttcatcagctttagaggtgaggacacgcgcaagagtttcacaagccatctttatgctgcttttcagcacaacaaaatccaaaccttcatagattacaagcttcccaaagggggtgagatctctcccataattctcaaagccattgaacactccaacctatctgtggttgttctctccaagcactatgcttcctccacttggtgcttgcgtgaactcgccaaaataatcgaacacaagaaacgtggtggacacattgtgatacctgtgttcttcaaggttgatccttcccatgtaaggaagcagactggtacttatggaaaagcctttgaaaaatatgagagagatggcaaacacagcatggccatgttgcagaaatggaaagctgctctcacagaagttgccaatttagttgggtggaacatgcggaattacaggacggaatatgaactcattgaggaaattgtcaaagttgttatgcaaaaactgaatcatatatatcccacagaagtaaaagaaagactggttggaattgatcaaaatcttgctcctattgaatcgttattgaaaatcaggtcaaaagaagttcgcataattggaatttggggcatgggaggattaggtaagacaaccattgccaatgctttatttgccaaattatcatctcaatatgaaggtagttgcttcttgacaaatgtaagggaagaatttgataagcgaggacttggttatttacgtgataaacttttttctgaggtactagaggatgtgaatctccatattagcacccctagagtaagatccacttttgttatgaggaggcttagacaaaagaaggttttgattgtgcttgatgatgtggacaatccgaagaagctagaatatcttgctgcacaacatgattgcttgggatcaggtagtagagtcattgtcactaccagagacaagcatgtacttagcaaaggggtagatgaaatatatgaggtcaagggattgtcccttcatcatgcagttaacctttttagtttaaatgcctttgggaaaacctatccgaaaatgggctttgaaatgctatctaaacaggtggttgatcatgcaaatggcaatccattggctttaaaagttttaggttcagttctccattccagaaatgagcagcaatggaacagtgctctgagaaaactcatgaaggttcctaatgaggaaattcagaatgtcttaagatggagttatgatggattagatgatgaacaaaaaaatatgttcctggacattgcatgctttttccaaggagaggataaagaaaatgttgtgaggctactagatatttgtggtttctatgcagatattggtataagaatccttctagacaaaggtcttataactttttctgacgacaatgaagtgtgtatgcatgacttgatacaagaaatgggctggcaaattgttcatcaggaatctatcaaagatcctggaaggcgtagccgattgtgggatccatacgaaatttatgaagtattgaaaaataacaagggaactgatgcagttgaaggcataatcttagatgtgtctcaaataagggtcttgccattgagctatgagaccttctcaaggatgatcaacataagatttctcaaattctatatggggaggagtaggacatgcaatttgcgccttccttcaggtcttgaatcattgcctaataaattaatgtacctacagtgggatggatacccttccaagtctttgccctcaactttttgtcctgacaaccttgttgtgctttccatgatggaaagccatgttgaaaaactttgggatggaaccaagAGTCTTGCGAGCTTGAAAGAGATCAACCTCTGTGCCTGCAAGAAATTAACTAATCTCCCAGATTTATCTCTAGCGCCAAATCTTGAAACTATAGATGTTTCTCATTGCACAAGTCTTCTTTGTGTTCCCTTATCAATCCAATATGTCAAGAAGCTTCTTTTGTTTAACTTGGAATCCTGCAAGAGTCTTAAGAGTCTTCCAAGAAACATTCACTTGTCTTCTCTTGAAATGTTCATTCTCAGACGTTGTTCAAGTCTCGATGAGTTTTCAGTGACTTCAGTGAACATGACACGCCTGGACTTAAGAGGAACATCAATAACTAGTTTCCCAGAATCAGTTTGGCAGCATCTGAACAAGCTTATTTACTTGAATCTGGAATCCTGCACCAAGCTCAAGAGTCTTACAAGCAACAGAcacttaaaatctcttcaaagactcaatcttagagattgttcaactcttgaggtgttttctgtgacttcggagaacatggaGCCAAAACCTGAGGATTTGCCTCCAATCTTCAGTGTAATATCTTCCTCTGAAAGGCCAAATATGGATGAACCATGGACTTTGTCATCCTTAACAGATTTATCTCTAAAAGGAAGCAGTATTGAGAATTTACCTGCAAGCATCAAAGATCTTCCTAGTCTGAAAAAGCTTACCTTGACCGAGTGCAAGAAGCTTCGGTGTTTACCAAGCCTTCCACCATCCTTGGAAGACTTATCCTTAGATGAAAGTGATACTGAGAGTTTACCTGTAAATATCGAAGATCTTTCTCATTTGAAGAAACTTACTCTGATTAACTACAAGAAGCTTTTGTCTCCACAGGATCTTCTACCATCTTTGAAAACTTCATTACTAAATGAAAATAAAGTTATTTCCCATCTTGTGAGCATGAAAGATCTTTCTCGTCAACAAAACTTTCATCTGGTTAAGTGGAAAAGATGTAATATTGAAAGCTTGCCAATAAGCATAAAACATCTTATGCATTTGAGAAAGATCACCTTAATTGAGTGCAAGAAGCTCCAGGCTGTACCAGAGCTCCCGGCATGCCTGAAATCGTTTTGTGCAGCTGACTGCAAATCACTTGAGATTGTCCAAAGTTCAAAGGCTGTCTTAATAGAAGATAGATATGTGTTCTATTACAATTGCATAAACTTGGATCAAAATTCATGCAACAACATCATCGCAGATGCACCCTTTGGGGCAGCTTATACTTCTTTGCAAGAAGGAACACCTCTTGGTCCTCTCATTTCTGTTTGTTTGCCAGGAACTGAAATCCCAGACTGGTTTAGCCACCGATCATCAAATTCTTCACTGGACATTGAAATTCCTCAACAGTGCTTCATTAATTCAAAGTTCTTAGGTTTCGCTCTGTGCCTTGTAATTGGTGGTTTCCAGCAAAACAGTTATGAAGGCTATGATCCAGATGTCAATTGCTATCACTTTGTGAAGTCAGCCCTTAGTTCTGACCCCAGTGTTCCCTTTCTTGGTCACTGCACAACTGTAATGCAGGTGCCAAAAAGTTTTAAGTCAGATCATATATTTATATGCTACTATCCTGCTTTTAATGCCTCCATACTGCAAGATTTCAAGGATTTAGGCTTGTACTATGATGCCAACAACTTAAGGCTTAGAGTCATCTTTAAATTTAAGGGTCCATCTCAACGGTTGGACATTGTAAAGAAGTGTGGGGTCAGACCTCTGTTGATTGCTGATACTGAAAGGCTTCACATAGAAAGTGAACTACAACTTGAAGAGAAGGGAGTATGA | 3741 | 0.1893 | MVVVSSKSSTKLVQSSCSCPPRMVKVSAEAASSSSSSFSSAKKHDVFISFRGEDTRKSFTSHLYAAFQHNKIQTFIDYKLPKGGEISPIILKAIEHSNLSVVVLSKHYASSTWCLRELAKIIEHKKRGGHIVIPVFFKVDPSHVRKQTGTYGKAFEKYERDGKHSMAMLQKWKAALTEVANLVGWNMRNYRTEYELIEEIVKVVMQKLNHIYPTEVKERLVGIDQNLAPIESLLKIRSKEVRIIGIWGMGGLGKTTIANALFAKLSSQYEGSCFLTNVREEFDKRGLGYLRDKLFSEVLEDVNLHISTPRVRSTFVMRRLRQKKVLIVLDDVDNPKKLEYLAAQHDCLGSGSRVIVTTRDKHVLSKGVDEIYEVKGLSLHHAVNLFSLNAFGKTYPKMGFEMLSKQVVDHANGNPLALKVLGSVLHSRNEQQWNSALRKLMKVPNEEIQNVLRWSYDGLDDEQKNMFLDIACFFQGEDKENVVRLLDICGFYADIGIRILLDKGLITFSDDNEVCMHDLIQEMGWQIVHQESIKDPGRRSRLWDPYEIYEVLKNNKGTDAVEGIILDVSQIRVLPLSYETFSRMINIRFLKFYMGRSRTCNLRLPSGLESLPNKLMYLQWDGYPSKSLPSTFCPDNLVVLSMMESHVEKLWDGTKSLASLKEINLCACKKLTNLPDLSLAPNLETIDVSHCTSLLCVPLSIQYVKKLLLFNLESCKSLKSLPRNIHLSSLEMFILRRCSSLDEFSVTSVNMTRLDLRGTSITSFPESVWQHLNKLIYLNLESCTKLKSLTSNRHLKSLQRLNLRDCSTLEVFSVTSENMEPKPEDLPPIFSVISSSERPNMDEPWTLSSLTDLSLKGSSIENLPASIKDLPSLKKLTLTECKKLRCLPSLPPSLEDLSLDESDTESLPVNIEDLSHLKKLTLINYKKLLSPQDLLPSLKTSLLNENKVISHLVSMKDLSRQQNFHLVKWKRCNIESLPISIKHLMHLRKITLIECKKLQAVPELPACLKSFCAADCKSLEIVQSSKAVLIEDRYVFYYNCINLDQNSCNNIIADAPFGAAYTSLQEGTPLGPLISVCLPGTEIPDWFSHRSSNSSLDIEIPQQCFINSKFLGFALCLVIGGFQQNSYEGYDPDVNCYHFVKSALSSDPSVPFLGHCTTVMQVPKSFKSDHIFICYYPAFNASILQDFKDLGLYYDANNLRLRVIFKFKGPSQRLDIVKKCGVRPLLIADTERLHIESELQLEEKGV | 1246 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cca01g01060 | 1246 | Pfam | NB-ARC domain | 231 | 450 | IPR002182 | GO:0043531 | |
Cca01g01060 | 1246 | Gene3D | Ribonuclease Inhibitor | 745 | 820 | IPR032675 | - | |
Cca01g01060 | 1246 | Gene3D | - | 209 | 371 | IPR027417 | - | |
Cca01g01060 | 1246 | Gene3D | - | 40 | 208 | IPR035897 | - | |
Cca01g01060 | 1246 | Pfam | C-JID domain | 1078 | 1223 | IPR045344 | - | |
Cca01g01060 | 1246 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 203 | 470 | IPR027417 | - | |
Cca01g01060 | 1246 | SUPERFAMILY | L domain-like | 516 | 808 | - | - | |
Cca01g01060 | 1246 | PANTHER | LEUCINE-RICH REPEAT-CONTAINING PROTEIN | 771 | 937 | IPR044974 | GO:0006952 | |
Cca01g01060 | 1246 | PANTHER | LEUCINE-RICH REPEAT-CONTAINING PROTEIN | 36 | 770 | IPR044974 | GO:0006952 | |
Cca01g01060 | 1246 | Pfam | TIR domain | 43 | 223 | IPR000157 | GO:0007165 | |
Cca01g01060 | 1246 | PANTHER | RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED | 771 | 937 | - | - | |
Cca01g01060 | 1246 | PANTHER | RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED | 36 | 770 | - | - | |
Cca01g01060 | 1246 | SMART | till_3 | 43 | 182 | IPR000157 | GO:0007165 | |
Cca01g01060 | 1246 | ProSiteProfiles | TIR domain profile. | 42 | 208 | IPR000157 | GO:0007165 | |
Cca01g01060 | 1246 | SUPERFAMILY | L domain-like | 750 | 1056 | - | - | |
Cca01g01060 | 1246 | SUPERFAMILY | Toll/Interleukin receptor TIR domain | 33 | 185 | IPR035897 | - | |
Cca01g01060 | 1246 | Pfam | Leucine Rich Repeat | 636 | 655 | IPR011713 | - | |
Cca01g01060 | 1246 | Gene3D | Ribonuclease Inhibitor | 552 | 744 | IPR032675 | - | |
Cca01g01060 | 1246 | Gene3D | Ribonuclease Inhibitor | 842 | 1027 | IPR032675 | - | |
Cca01g01060 | 1246 | Gene3D | - | 377 | 460 | IPR042197 | - | |
Cca01g01060 | 1246 | PRINTS | Disease resistance protein signature | 243 | 258 | - | - | |
Cca01g01060 | 1246 | PRINTS | Disease resistance protein signature | 411 | 425 | - | - | |
Cca01g01060 | 1246 | PRINTS | Disease resistance protein signature | 868 | 884 | - | - | |
Cca01g01060 | 1246 | PRINTS | Disease resistance protein signature | 319 | 333 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Cca01g01060 | Cca-Chr1 | 15685580 | 15694406 | Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Cca01g01060 | 38 | 883 | WRKY Transcription Factor Family | AT4G12020 | 34.575 | 3.11e-126 | 426 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cca01g01060 | - | - | ccaj:109805736 | 2051.17 |