Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca01g01045 ATGGAAGCATGGTTCATCACCCTTGTCTCTTTCTGCGTCTGCTTTCTCATCCGAGCCATCTTTTCGCTTCACTCATCACCAACCAAAGCCAGTGGCAAAGCAATTATCACCACCCCACCCGGTCCCTCACACATCTCAATCATAACGCGCCTCCTATGGCTCAGAAAATCCTTCACAGAACTCGAACCAACTCTTCGAACGTTCCACGCCAAGTACGGCCCCATCATCACTCTCCGCATCGGCGCTAGCCCCGCCATCTTCATCGCCGACGGCGCCCTCGCCCACCGCGCCCTCGTCCACAACGGCTCCCTCTTCTCCGACCGCCCCGAGGCCCCCGCCACCGCCGCAATCCTCAGCAGCAACCGCCGCAACATCAGCTCCGCCTCCTACGGCGCCACGTGGCGCACCCTCCGCCGCAACCTCGCCTCCGAGATGCTCCACCACTCCCGCGTTAGGTCCTTCTCCGGAATCCGCAAGTGCGTGCTGAACAGCCTCCTCACGCGCCTGAAATCCGCTTCTGAGTCCATCCACTCCGTTAGAGTCATCGACCACTTGCGACACGCCATGTTCTGCCTTCTCGTCTTCATGTGCTTCGGGGAGAGACTCGACGAGGGGAAAGTCAGAGACATCGCGCGCGTGGAGAGACAATTGCTTCTGCGCCTCGGGAGCTTCAATATTCTCAACTTCTGGCCCAGCGTCACGCGCGTTTTGTACCGCAAAAAATGGTTGGAGATGCTGAGGTTAAGGAAGGAGCAAGAGGACGTGTTGCTTCCGCTTATAAGAGCCAGAAAGCAAAAGCAAAAACAAGCCAAGGAAAGTGGATTAAACGACGACCACGATGACGTCGTTTCGTACGTTGACACTTTACTGGATTTGCAGTTGCCGGAGGAGAAGCGCGAGCTGAACGAAGGGGAACTAGTGACGCTGTGTAACGAGTTTCTAAACGCGGGTACGGACACCACTTCCACCGCGTTGCAGTGGATCATGGCGAATTTGGTCAAGTACCCGCACGTGCAAGAGAGGGTGGTGGAGGAGATTAAACAAGTGGTGGGTGAAAAGAAGGAGAGGGAAGTGAAAGAAGAAGAGTTGCATAAACTGGGTTATCTCAAAGCTGTGGTTTTGGAAGGGTTGCGGCGCCACCCACCGGGGCACTTTGTGTTGCCGCATGCGGTCACTGAAGACGTTGTTTTGAAGGACTACTTGGTGCCGAAAAATGGGACGGTGAATTTCATGGTGGCGGAGATGGGGTTGGACCCTAAGGTTTGGGAGGATCCCTTGGCGTTTAAGCCTGAGAGGTTTTTGAATGATGAGGGGTTTGATATTACTGGTACTAAAGAGATCAAGATGATGCCCTTTGGAGCAGGGAGGAGGATTTGTCCTGGTTATAATTTGGCGTTGCTTCATTTGGAGTATTTTGTGGCTAATTTGGTTTTGAATTTTGAGTGGAAGGTTCCTCAGGGAGGGGATGTTGATTTGTCGGAGAAAAAGGAGTTCACTGTGGTCATGAAAAATGCTTTGCAGGTTCATGTTTCTCCTAGGATATAG 1545 0.5333 MEAWFITLVSFCVCFLIRAIFSLHSSPTKASGKAIITTPPGPSHISIITRLLWLRKSFTELEPTLRTFHAKYGPIITLRIGASPAIFIADGALAHRALVHNGSLFSDRPEAPATAAILSSNRRNISSASYGATWRTLRRNLASEMLHHSRVRSFSGIRKCVLNSLLTRLKSASESIHSVRVIDHLRHAMFCLLVFMCFGERLDEGKVRDIARVERQLLLRLGSFNILNFWPSVTRVLYRKKWLEMLRLRKEQEDVLLPLIRARKQKQKQAKESGLNDDHDDVVSYVDTLLDLQLPEEKRELNEGELVTLCNEFLNAGTDTTSTALQWIMANLVKYPHVQERVVEEIKQVVGEKKEREVKEEELHKLGYLKAVVLEGLRRHPPGHFVLPHAVTEDVVLKDYLVPKNGTVNFMVAEMGLDPKVWEDPLAFKPERFLNDEGFDITGTKEIKMMPFGAGRRICPGYNLALLHLEYFVANLVLNFEWKVPQGGDVDLSEKKEFTVVMKNALQVHVSPRI 514
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca01g01045 514 PANTHER CYTOCHROME P450 4 512 - -
Cca01g01045 514 SUPERFAMILY Cytochrome P450 39 513 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca01g01045 514 Pfam Cytochrome P450 39 504 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca01g01045 514 PRINTS E-class P450 group I signature 69 88 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca01g01045 514 PRINTS E-class P450 group I signature 93 114 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca01g01045 514 PRINTS E-class P450 group I signature 188 206 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca01g01045 514 PRINTS E-class P450 group I signature 305 322 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca01g01045 514 PRINTS E-class P450 group I signature 325 351 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca01g01045 514 PRINTS E-class P450 group I signature 370 388 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca01g01045 514 PRINTS E-class P450 group I signature 411 435 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca01g01045 514 PRINTS E-class P450 group I signature 449 459 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca01g01045 514 PRINTS E-class P450 group I signature 459 482 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca01g01045 514 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 452 461 IPR017972 GO:0005506|GO:0016705
Cca01g01045 514 PRINTS P450 superfamily signature 316 333 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca01g01045 514 PRINTS P450 superfamily signature 371 382 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca01g01045 514 PRINTS P450 superfamily signature 450 459 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca01g01045 514 PRINTS P450 superfamily signature 459 470 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca01g01045 514 Gene3D Cytochrome P450 34 514 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca01g01045 514 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 4 512 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca01g01045 Cca-Chr1 15463724 15465412 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca01g01045 1 513 Cytochrome P450 AT1G64940 55.814 0.0 580
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca01g01045 K24184 - gmx:100805244 783.097