Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca01g01044 ATGGAGGCGTGGTTCATAATCCCTCCGCCACCACCACCGTCGCCATCCCTCCGGGCCCCACCCACATCCCCATCATCACGAGCATCCTCTGGCTCCGCAAATCCTTCTCGGAACTCGAGCCCATCCTCCGGAGCCTCCACGCCAAGTACGGCCCCATCCTCCCGCCCCGCCGTCTTCATCGCCGACCGCGCCATCGCCTACCGCGCCCTCGTCCACAACGGCTCCCTCTTCTCCGACCGCCCCAAGGCCCTCCCTACCGCCAAACTCGTCACCAGCAACCAGCACAACGTCAGCTCCGCCTCCTACGGCGCCACGTGGCGCACTCTCCGCCGCAACCTCGCCTCCGAGATGCTCCACCCTTCCCGCGTCAAATCCTTCTCCCCGACCCGCGCCTGGGTCCTACGCGCCCTCCTCACGCGCCTCGCTTCCGATTCCGAAGCCAACCCCTCCCTCAGCGTCATCCCCCACTTCCGCTACGCCATGTTCTGCCTCCTCGTCTTCATGTGCTTCGGTCAAAGGGTCAACGACGCCAAGGTCAGAGACATCGAGCGCGTCCAGAGACAAATGCTTCTCGGCTTCAACAGGTTCAACATCCTCAACTTCTGGCCCAGCCTCACGCGCCTTTTGCTCCGCGGAAAGTGGCAGGAGTTGCTTAGGTTAAGGAAGGACAAGGAAAACGTGTTGCTTCCGCTTATAAGAGCCAGGAAGCAGAAGCAAAACCAAAACGGGTCAAACCACCACGACGACGTCGTTTCCTACGTTGACACGTTGCTGGATTTGCAGTTGCCCGAGGAGAAGCGCAAGCTGAGTGAAGAGGAAATCGTGACGCTGTGTAGTGAGTTTCTCGACGGGGGTACGGACACCACTTCCACTGCGTTGCAGTGGATCATGGCGAATTTGGTCAAGTACCCGCACGTGCAAGAGAGGGTGTTGCAGGAGATTAAACAAGTGGTGGGTGAAAGAGAGGAAAGGGAAGTGAAAGAAGAAGAGTTGCATAAACTGGGTTATCTCAAAGCTGTGGTTTTGGAAGGGTTGCGGCGCCACCCACCTGGCCACTTTGTGTTGCCGCATGCGGTGTCTGAGGATGTTATTTTGGATGATTACTTGGTGCCGAAGGAGGCGACGGTGAATTTCATGGTGGCGGAGATGGGGTTGGACCCTAAGGTTTGGGAGGATCCCTTGGCGTTTAAGCCTGAGAGGTTTTTGAACGATGAAGGGTTTGATATCACTGGGAGCAAAGAGATTAAGATGATGCCCTTTGGAGTTGGGAGGAGGATTTGTCCTGGTTATAATTTAGCTTTGCTTCATTTGGAGTATTTTGTGGCTAATTTGGTTTTGAATTTTGAGTGGAAGGTTCCTCAGGGAGGAGATGTGGATTTGTCGGAGATTCAAGAGTTCACTGTCGTCATGAAAAATCCCCTTCAGGTTGGACTATAA 1437 0.556 MEAWFIIPPPPPPSPSLRAPPTSPSSRASSGSANPSRNSSPSSGASTPSTAPSSRPAVFIADRAIAYRALVHNGSLFSDRPKALPTAKLVTSNQHNVSSASYGATWRTLRRNLASEMLHPSRVKSFSPTRAWVLRALLTRLASDSEANPSLSVIPHFRYAMFCLLVFMCFGQRVNDAKVRDIERVQRQMLLGFNRFNILNFWPSLTRLLLRGKWQELLRLRKDKENVLLPLIRARKQKQNQNGSNHHDDVVSYVDTLLDLQLPEEKRKLSEEEIVTLCSEFLDGGTDTTSTALQWIMANLVKYPHVQERVLQEIKQVVGEREEREVKEEELHKLGYLKAVVLEGLRRHPPGHFVLPHAVSEDVILDDYLVPKEATVNFMVAEMGLDPKVWEDPLAFKPERFLNDEGFDITGSKEIKMMPFGVGRRICPGYNLALLHLEYFVANLVLNFEWKVPQGGDVDLSEIQEFTVVMKNPLQVGL 478
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca01g01044 478 SUPERFAMILY Cytochrome P450 54 476 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca01g01044 478 MobiDBLite consensus disorder prediction 1 20 - -
Cca01g01044 478 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 53 477 - -
Cca01g01044 478 PANTHER CYTOCHROME P450 53 477 - -
Cca01g01044 478 Gene3D Cytochrome P450 44 478 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca01g01044 478 PRINTS E-class P450 group I signature 417 427 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca01g01044 478 PRINTS E-class P450 group I signature 65 86 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca01g01044 478 PRINTS E-class P450 group I signature 293 319 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca01g01044 478 PRINTS E-class P450 group I signature 338 356 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca01g01044 478 PRINTS E-class P450 group I signature 273 290 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca01g01044 478 PRINTS E-class P450 group I signature 379 403 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca01g01044 478 PRINTS E-class P450 group I signature 427 450 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca01g01044 478 PRINTS P450 superfamily signature 418 427 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca01g01044 478 PRINTS P450 superfamily signature 427 438 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca01g01044 478 PRINTS P450 superfamily signature 339 350 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca01g01044 478 PRINTS P450 superfamily signature 284 301 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca01g01044 478 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 420 429 IPR017972 GO:0005506|GO:0016705
Cca01g01044 478 MobiDBLite consensus disorder prediction 1 54 - -
Cca01g01044 478 Pfam Cytochrome P450 51 473 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca01g01044 478 MobiDBLite consensus disorder prediction 21 54 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca01g01044 Cca-Chr1 15427412 15428993 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca01g01044 53 475 Cytochrome P450 AT1G64940 58.837 0.0 544
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca01g01044 K24184 - gmx:100795683 674.855