Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca01g01027 ATGCGTCCTGATTTTACGACAGTAACTGTTGACGGAGTACAGACGGATGTGCACCAAGTAGTTCCACCACCCTACAAGAGCACCTTCCAGAAGTTTTGCACCAAGCTCAAGGAAACTTTTTTCCCTGATGATCCTCTACGCCAATTTAAGGGACAACCTCTTAAGACACAACTAATCCTCGGAGCTAAATATGTGTTCCCTATCTTTCAATGGGCTCCTAATTACAACCTCAGACTCTTTAAATCTGACCTTATTTCTGGTCTCACAATTGCTAGTTTGGCCATCCCCCAGGGAATCAGTTATGCAAAGCTTGCAAATCTTCCTGCAATTCAGGGACTCTATTCTAGTTTTGTTCCCCCTCTTGTGTACGTTGTTCTTGGAAGTTCAATGGACCTTGCAGTAGGACCTGTTTCTATTGCTTCCCTAGTACTAGGATCCATGCTCGCAGAGAAAGTGTCTCCCACTGCGCAACCTGATCTATACCTTCAGTTAGCTTTAACTTCGACATTATTTGCTGGGATCTTTCAATCCGCTCTTGGAATTCTAAGATTAGGATTTATCATTGATTTTCTATCAAAGGCAATTCTTCTGGGGTTCATGGCTGGATCAGCTATAATTGTAGCTCTGCAACAACTCAAGAGCCTTCTCGGAATCAAACATTTCACTAAAAAGATGGCCCTCATTCCTGTTTTGACTTCTGTTTTTAAGAACACTAACGAGTGGTCATGGCAAACAATATTGATGGGGATTTCCTTCTTGACGTTGCTACTCCTTGCAAGACACATTAGCATAAGGAAACCAAGGCTATTCTGGGTCTCAGCTGGAGCTCCTCTTCTCTCTGTAATAATCTCTACGGTCCTGTCTTATGTAATCAAAGCTGAACGTCATGACATCAGTGTGATTGGAAAATTGCCACAAGGAGTAAATCCTCCTTCAGCGGATAAGTTATTCATTCATGGAAGTCATCTCCCTCTGGTCATCAAAACTGGCCTTATCACTGGCATTTTATCCCTCACTGAGGGAATTGCAGTTGGAAGAACATTTGCTACTATCAGAAACTACAAAGTGGATGGAAATAAGGAAATGATTGCAATCGGGTTCATGAATGTGATTGGCTGCACCACATCCTGCTATGTTACAACAGGATCTTTCTCTCGCTCAGCTATCAATCATAACGCAGGTGCTAGAACAGCAATGTCTAACATAGTAATGTCTGTTACTGTCTTGGTGACTCTACTGTTTCTTATGCCATTGTTTCAATACACACCAAATGTTATATTGGGTGCAATCATAATAGCAGCAGTAATTGGCCTCATTGATATCCCTTCTGCTCGTCTCATTTGGAAGCTAGACAAATTCGATTTCATTGTGATGATGACTGCATTCTTTGGTGTGATTTTTATCTCTGTCCAGCTCGGCCTTGGTATTGCAGTCGCATTATCAGTTTTCAGGATACTGCTTCAAGTTACAAGGCCAAAAACAGTAATGTTGGGGAAAATACCTGAGACAAACATATATAGAAATCTTCATCATTATAAAGAAGCTGTAAGAGTACCTGGTTTTCTTATTTTAAGTATAGAGTCTCCCATCAATTTCGCCAACATTACATATCTCAACGAGAGAATATTACGATGGTTAGAAGAAGAAGAAGCTAACAAAGAGCAAAAGCTTCAATTTGTGATTCTGGAAATGTCAGCTGTGAGTACCATAGACACGAGTGGAGTCTCACTTTTCAAGGACTTGAAAACAGCATTGACAATGAAGGGTGTTGAGCTTGTGATGGTGAATCCTCTAGCTGACGTCATAGAAAAGCTGAAAATAGCAGATAAAGCTAATGATTTCATTCGACCAGATTACCTTTTCTTAACAGTTACGGAGGCTGTCACTTCACTTTCATCAACAATGAAGGAGGGTCAATCACCAAGCGAGGAAAACCtgtaa 1941 0.4091 MRPDFTTVTVDGVQTDVHQVVPPPYKSTFQKFCTKLKETFFPDDPLRQFKGQPLKTQLILGAKYVFPIFQWAPNYNLRLFKSDLISGLTIASLAIPQGISYAKLANLPAIQGLYSSFVPPLVYVVLGSSMDLAVGPVSIASLVLGSMLAEKVSPTAQPDLYLQLALTSTLFAGIFQSALGILRLGFIIDFLSKAILLGFMAGSAIIVALQQLKSLLGIKHFTKKMALIPVLTSVFKNTNEWSWQTILMGISFLTLLLLARHISIRKPRLFWVSAGAPLLSVIISTVLSYVIKAERHDISVIGKLPQGVNPPSADKLFIHGSHLPLVIKTGLITGILSLTEGIAVGRTFATIRNYKVDGNKEMIAIGFMNVIGCTTSCYVTTGSFSRSAINHNAGARTAMSNIVMSVTVLVTLLFLMPLFQYTPNVILGAIIIAAVIGLIDIPSARLIWKLDKFDFIVMMTAFFGVIFISVQLGLGIAVALSVFRILLQVTRPKTVMLGKIPETNIYRNLHHYKEAVRVPGFLILSIESPINFANITYLNERILRWLEEEEANKEQKLQFVILEMSAVSTIDTSGVSLFKDLKTALTMKGVELVMVNPLADVIEKLKIADKANDFIRPDYLFLTVTEAVTSLSSTMKEGQSPSEENL 646
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca01g01027 646 Gene3D STAS domain 491 633 IPR036513 -
Cca01g01027 646 CDD STAS_SulP_like_sulfate_transporter 512 624 - -
Cca01g01027 646 Pfam STAS domain 512 627 IPR002645 -
Cca01g01027 646 Pfam Sulfate permease family 80 460 IPR011547 GO:0016021
Cca01g01027 646 ProSiteProfiles STAS domain profile. 511 631 IPR002645 -
Cca01g01027 646 SUPERFAMILY SpoIIaa-like 517 631 IPR036513 -
Cca01g01027 646 PANTHER BNAA09G30120D PROTEIN 16 638 IPR030313 -
Cca01g01027 646 TIGRFAM sulP: sulfate permease 67 627 IPR001902 GO:0015301|GO:0016020|GO:0055085
Cca01g01027 646 PANTHER SULFATE TRANSPORTER 16 638 IPR001902 GO:0015301|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca01g01027 Cca-Chr1 15080731 15091075 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca01g01027 16 641 Inorganic Solute Cotransporters AT3G15990 63.016 0.0 806
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca01g01027 K17471 - gmx:100779433 1029.24