Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cca01g01023 | ATGGATGATGAAGTTGTTCAGCGAGTGTTTCATGAAGGAGGACGCGATTACTTCCAACAACAGCCTTCAACTTCTTCGTCTTCCTCTTCCATCCTTCAATCTCTCCCTCTCCATGTGTCTTTTGATCATGGATATTATTTGTTGGTAAAATCTATCCAAGAACTCCGAGAGAAAAAGGATGGCCTTGTTAGTATTGGCATTGGTGGTCCAAGTGGATCTGGTAAAACAAGCTTAGCAGAAAAGGTAGCATCTGTTATTGGTTGTACTGTTATATCAATGGAGAACTATCGTGATGGAGTTGATGAAGGGAATGATCTAGACTCTATAGATTTTGATACCCTGATCAAGAATCTTGAGGATTTGACTAAAGGCAATGATACATTAATCCCAGAGTTTGACTATCAGCTAAAAAGGCGTGTTGGTTATAAAGCAATAAAGAGCACTTCATCTGGGGTGGTAATAGTTGATGGCACATATGCATTGCATGCAAAATTGCGGTCTTTACTGGATATTCGAGTTGCTGTGGTTGGTGGAGTTCATTTTAGTCTGCTTTCTAAAGTTCGCTACGATATTGGAGATTCTTGTTCACTGGATTACCTTATAGATAGCATTTTCCCATTATTTAGGAAAGACATTGAGCCAGATCTTCATCATGCGCAGATCAGAATTAATAACAGCTTTGTCTCATCATTCAGAGAGGCAATCTACAAGGTTAAATGCAGAAGTGAGTCTTCAGATGATTCTGGTTCTGCTTTTCAAGGAAATGAAGCCCAGACAGATAATTTTATTGAAATGTACCTTAGACCACCTTCAGCAAGTGAAGAAGCAAGGATAAATGATTGGATCAAAGTGCGACAGTCTGGGATTAGATATTATTTATCACTTGGTGACCAGAGGATTGTTGACAAGAATTTCATTATCAGGCCTAAAGCTGAATTTGAGGTTGGTCGAATGACATTGGGTGGATTATTGGCTCTTGGGTACACTGTTGTGGTTAGTTATAAACGTGCATCCACTACTGTCAATAATGGGAAGGTTTCGTTGTCTTTTGAAACCATTGATGTTCTTGGCGAGACATTCATGGTGATGAGAGGAACTAATAGAAAAACTGTTGGAACAGAAGCATTAAGGATGGGTATAAATGGACCTTGGATTACTAAATCATATCTGGAAATGATTCTTGAAAGAAAAGGTGTACCTCGACTTAGTACACCACCACTTGTGTCTAATGCAACTGTAGCTGGTAGTCAAGAAACAGTGATCATTGCACCAAAGCCAATCCGTGTTACTCCTGACCTTGGTACTGGGATTGATGATTTATCTCAGCCGTGGACTCGATCCCCAACAAAATCTAAAATGGAACCTGTTGTGGCTACATGGCATTTCATATCTTCAGATTCCTCCCAGCCTGACAACTCAGTCCTAGATCCTTCATCTTTCAGGGATAGTATTAGGCTTGCTCCAATGCCTGATTCATATGACTTGGATAGGGGATTGCTTTTGGCAGTTCAAGCAATACAAGCATTGTTGGAGAATAAAGGTGTCCCAGTCATAGTTGGAATTGGAGGTCCAAGTGGCTCTGGAAAGACTAGTTTGGCTCATAAAATGGCAAATATAATTGGTTGTGAAGTAGTTTCCCTGGAAAGCTATTATAAACAAGTAAAGGATTTTAAATATGATGACTTCAGTGCACTTGATTTATCTTTGCTATCAAAGAATATTGATGACATAAGAAATGGTCAAAGAACAAAAGTGCCTATATTTGACTTGGAAAGTGGTGCTCGGAGTGGTTTCAAGGAACTTGAAGTTTCTGAAGATTGTGGTGTGATTATATTTGAAGGCGTCTTTGCTTTGCATCCTGATATTCGAATATCACTTGACTTGTGGATTGCTGTTGTTGGAGGTGTTCATTCACATTTGATTTCACGAGTTCAAAGAGATAAGAGTAAAGTGGGATGTTTTATTTCCCAAAATGAGATCATGATGACTGTGTTTCCTATGTTCCAACAGCTTATTGAACCTCATCTTGTTCATGCACATCTTAAAATTCGAAATGACTTTGACCCTGTGCTTTCTCCTGAGAGTTCATTATTTGTATTAAAGAGTAACAAAAAAGTAGCATATCAAGATATTGTTTCAATTCTTGATCCAGCAAAATTTTGCAGTTCAGTGCAGAAATTTATTGATATTTATATAAGGCTCCCTGGGATCCCTTCTAATGGGCAATTGAGAGATAGTGATTGTATTCGAGTCAGAATATGTGAAGGCAGATTTGCATTGCTGATACGAGAGCCTATCAAAGAAGGGAACTTTATCATTCAGCCTAAAGTGGATTTTGATATAAGCATTAGTACGGTTGCTGGTCTTCTTAATCTTGGGTATCAAGCAGTTGCTTATATTGAAGCGTCTGCATTCATCTATCAAGATGGAAAGATTCTAATTGAGGTTGATCATCTACAAGATGTCCCTGGCCCTTACATTCAGATAAAGGGTGTTAATAAAGATGCAGTGGAAGCAGCAGGTTCAATGCTTAAATTGGATGGTTCGTATACTACTAAGAGTTATCTTGAAATAATTTTGGAAAGACTACCAGCATTAGAAAGAACTTCTGGTGGAATTCATTCTCAGCAATCAGCAAGGCTGCTAGAGATTGTTGAATTTATTCAATCTCAGGGATGTAGCTCTGCTTCAGAGTCCTCATCAAGTAGGGTAGTCTCTCCAATTGAAGGGATTATTGAGGAGATGCAATCAAGGATTAGAAGGCTTGAAAGATGGTTAGCTATAAATACGGTTCTATGGACATTTCTTATGTCTGCCCTTGTTGGTTATTCACTTTATCAAAGGCGGCGTCAATAA | 2856 | 0.3869 | MDDEVVQRVFHEGGRDYFQQQPSTSSSSSSILQSLPLHVSFDHGYYLLVKSIQELREKKDGLVSIGIGGPSGSGKTSLAEKVASVIGCTVISMENYRDGVDEGNDLDSIDFDTLIKNLEDLTKGNDTLIPEFDYQLKRRVGYKAIKSTSSGVVIVDGTYALHAKLRSLLDIRVAVVGGVHFSLLSKVRYDIGDSCSLDYLIDSIFPLFRKDIEPDLHHAQIRINNSFVSSFREAIYKVKCRSESSDDSGSAFQGNEAQTDNFIEMYLRPPSASEEARINDWIKVRQSGIRYYLSLGDQRIVDKNFIIRPKAEFEVGRMTLGGLLALGYTVVVSYKRASTTVNNGKVSLSFETIDVLGETFMVMRGTNRKTVGTEALRMGINGPWITKSYLEMILERKGVPRLSTPPLVSNATVAGSQETVIIAPKPIRVTPDLGTGIDDLSQPWTRSPTKSKMEPVVATWHFISSDSSQPDNSVLDPSSFRDSIRLAPMPDSYDLDRGLLLAVQAIQALLENKGVPVIVGIGGPSGSGKTSLAHKMANIIGCEVVSLESYYKQVKDFKYDDFSALDLSLLSKNIDDIRNGQRTKVPIFDLESGARSGFKELEVSEDCGVIIFEGVFALHPDIRISLDLWIAVVGGVHSHLISRVQRDKSKVGCFISQNEIMMTVFPMFQQLIEPHLVHAHLKIRNDFDPVLSPESSLFVLKSNKKVAYQDIVSILDPAKFCSSVQKFIDIYIRLPGIPSNGQLRDSDCIRVRICEGRFALLIREPIKEGNFIIQPKVDFDISISTVAGLLNLGYQAVAYIEASAFIYQDGKILIEVDHLQDVPGPYIQIKGVNKDAVEAAGSMLKLDGSYTTKSYLEIILERLPALERTSGGIHSQQSARLLEIVEFIQSQGCSSASESSSSRVVSPIEGIIEEMQSRIRRLERWLAINTVLWTFLMSALVGYSLYQRRRQ | 951 |
Showing 1 to 1 of 1 entries
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cca01g01023 | 951 | Gene3D | - | 702 | 863 | - | - | |
| Cca01g01023 | 951 | PRINTS | Uridine kinase signature | 516 | 533 | - | - | |
| Cca01g01023 | 951 | PRINTS | Uridine kinase signature | 543 | 554 | - | - | |
| Cca01g01023 | 951 | PRINTS | Uridine kinase signature | 637 | 647 | - | - | |
| Cca01g01023 | 951 | CDD | UMPK_like | 75 | 226 | - | - | |
| Cca01g01023 | 951 | PANTHER | URIDINE KINASE | 603 | 942 | - | - | |
| Cca01g01023 | 951 | PANTHER | URIDINE KINASE | 2 | 419 | - | - | |
| Cca01g01023 | 951 | PANTHER | URIDINE KINASE | 476 | 602 | - | - | |
| Cca01g01023 | 951 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 504 | 686 | IPR027417 | - | |
| Cca01g01023 | 951 | CDD | UMPK_like | 518 | 686 | - | - |
Showing 1 to 10 of 22 entries
Duplication type information
Functional genes information
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cca01g01023 | - | - | gmx:100778905 | 1716.44 |
Showing 1 to 1 of 1 entries