Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cca01g00988 | ATGGAGTCAGGTCCTCCGGCGAACGATTTGTGTTCGGTGTGCCATGCCAACTTTCACATCCCATGCCAAGCCAATTGTTCTCACTGGTTTTGCGGTAATTGCATCATGCTGGTGTGGCAGCACGGATCAGGGGCTCGCCCTTGCAAGTGCCCCCTCTGTCGCCGACCCATTACTCTCTTAGTCCCAACCGAAGACTCTCTTAGGCAGAACCATGACCCTGAAGTTGCTCAGATTCTATCCAAGATTCATGCTTATAACCGTTTCTTTGGTGGCCAACCCACCTCACTTCTTCAGAGGATGCAAGATCTCCCTTTTCTGCTGCATAGGCTGCTGCGGGAATTCTTGGACCCTCAAAGATCCCTTCCTCTTGTCATTCGTGCCCGTGTCTTTGTTGCAGTTACTTTCCTTACTCTTTCACTTCTTCCTTCCTTACCTGTTGTGTGTGTGTGGTTGCCCTAG | 459 | 0.5076 | MESGPPANDLCSVCHANFHIPCQANCSHWFCGNCIMLVWQHGSGARPCKCPLCRRPITLLVPTEDSLRQNHDPEVAQILSKIHAYNRFFGGQPTSLLQRMQDLPFLLHRLLREFLDPQRSLPLVIRARVFVAVTFLTLSLLPSLPVVCVWLP | 152 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cca01g00988 | 152 | SUPERFAMILY | RING/U-box | 9 | 62 | - | - | |
Cca01g00988 | 152 | ProSitePatterns | Zinc finger RING-type signature. | 26 | 35 | IPR017907 | - | |
Cca01g00988 | 152 | PANTHER | BNAC07G13660D PROTEIN | 6 | 138 | - | - | |
Cca01g00988 | 152 | PANTHER | UNCHARACTERIZED | 6 | 138 | IPR038896 | GO:0061630 | |
Cca01g00988 | 152 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 2 | 101 | IPR013083 | - | |
Cca01g00988 | 152 | ProSiteProfiles | Zinc finger RING-type profile. | 11 | 54 | IPR001841 | - |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Cca01g00988 | 27 | 133 | C3H Transcription Factor Family | AT1G22510 | 64.486 | 1.59e-45 | 145 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cca01g00988 | K15707 | - | gmx:100306204 | 247.669 |