Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca01g00980 ATGGCAAACAACGATCAAAACCAAACCGAAGCTGGAAGGCACCAAGAAGTTGGGCACAAGAGCCTTCTCCAGAGTGATGCCCTTTACCAGTATATTCTAGAGACCAGTGTCTACCCAAGAGAACATGAAGCCATGAAGGAATTGAGAGAGTTGACAGCAAAACACCCATGGAACATCATGACCACCTCTGCGGACGAAGGGCAATTCTTGAACTTGCTCCTTAAGCTTATCAATGCAAAGAACACCATGGAAATTGGTGTCTACACAGGCTATTCTCTGCTAGCCACCGCCCTCGCTCTTCCTGAAGATGGAAAGATCTTGGCCATGGACATTAACAGGGAGAATTACGAGCTGGGTTTGCCAGTGATAAAAAAAGCTGGCGTTGAGCACAAAATTGAATTCAGAGAAGGTCCTGCTCTCCCAGTTCTGGATGAAATGATGAAAGATGAGAAGAACCATGGGAGCTACGATTTCATCTTTGTGGATGCGGACAAGGACAACTACATAAACTACCACAAGAGGCTGATTGAGCTGGTGAAAGTTGGGGGTGTGATCGGGTACGACAACACCCTGTGGAACGGGTCTGTGGTGGCACCCCCTGATGCGCCTCTCAGGAAGTACGTTAGGTATTACAGGGACTTCGTGTTGGAGCTGAACAAGGCCCTCGCTGCGGACCCCAGGATAGAAATTTGCATGCTACCGGTTGGTGATGGAATCACTCTCTGCCGTCGGATCAAGTGA 741 0.4872 MANNDQNQTEAGRHQEVGHKSLLQSDALYQYILETSVYPREHEAMKELRELTAKHPWNIMTTSADEGQFLNLLLKLINAKNTMEIGVYTGYSLLATALALPEDGKILAMDINRENYELGLPVIKKAGVEHKIEFREGPALPVLDEMMKDEKNHGSYDFIFVDADKDNYINYHKRLIELVKVGGVIGYDNTLWNGSVVAPPDAPLRKYVRYYRDFVLELNKALAADPRIEICMLPVGDGITLCRRIK 246
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca01g00980 246 PANTHER CAFFEOYL-COA O-METHYLTRANSFERASE 1 3 246 - -
Cca01g00980 246 ProSiteProfiles SAM-dependent O-methyltransferase class I-type profile. 21 245 IPR002935 GO:0008171
Cca01g00980 246 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 25 244 IPR029063 -
Cca01g00980 246 CDD AdoMet_MTases 84 185 - -
Cca01g00980 246 Pfam O-methyltransferase 34 245 IPR002935 GO:0008171
Cca01g00980 246 Gene3D Vaccinia Virus protein VP39 20 246 IPR029063 -
Cca01g00980 246 PANTHER O-METHYLTRANSFERASE-RELATED 3 246 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca01g00980 Cca-Chr1 14177763 14179374 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca01g00980 5 245 Monolignol Biosynthesis Gene Families AT4G34050 89.627 1.39e-167 462
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca01g00980 K00588 - gmx:100811247 464.536