Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca01g00964 ATGAACTTCAGAAATTACGGAGATGACCCCACTTGGGATGCCATGCAGGGGAAGACACCAACAAATGTAACTCTGATGAGACAACCCTCAGTGTACTCCCTCACATTTGATGAGTTTCAAAGCACCATGGGTGGGATTGGGAAGGATTTTGGGTCCATGAACATGGATGAACTCTTGAAGAACATTTGGACAGCCGAGGAGACTCAAGCCTTGGGATTTTCAGCTGGTGCAGGAGAAGGTTATAACCATAACCCAATTAGTGGTGGCTTGCAAAGACAAGGCTCATTGACATTGCCAAGGACTCTTAGTCAGAAAACAGTAGATGAGGTTTGGAGGGACTTGATCAAAGATAGTGGTGGGGCCAAAGATGGGAGTGGCAATGATGGTGGTTCATCCATGCCTCAAAGGCAACCAACATTGGGAGAAATGACTTTGGAGGAGTTTTTGGTGAGAGCTGGGGTTGTTAGAGAGGATGTGCCTCAACAAATTGGTAAACCAAACAACAATGGATCATGGTTTGGTGACTTTCATAGACCAAACACTAGCACTGGCCTACTTCTTGGCTTTCAACAACCAAATAGAAGCAATGGGAATTTGGGTGAGAGGGTGGCGGACGGAAATAACAATAACAATAGCTTAGTCACCAAACATCCTCCTCCCTTATCACTAAACTCAAACCACTCTCAAAGACAAGCACAACAGCCACCACCACTTTTCCCAAAACCAACCAATGTGGCTTTTGCTGCTCCTATGCACTTGTTGAACAATGGTCAACTTGCTAGCCCTGGCAGAAGGGGAGGGTTGCTTGGAGTTGTTGACCATTCAATGAATGTTGGAATGGTTAGTTTACCCAATGCTAATGTCACAGCTACTGGGGCTTCTCCCTCATGTAAATTATCACCGAATGTAATTACAAGGAGTAATGGAGATACCTCTTCAACGTCACCAGTTCATTATGTAATCAACAGGGGAAGGAAATGCAGTGCCATAGAGAAAGTGGTCGAGAGGAGACAGAGGAGAATGATAAAAAACAGAGAATCAGCTGCCAGGTCACGGGCTCGTAAGCAGGCCTACACTTTCGAACTAGAAGCCGAAGTTGCAAAACTTAAGGAATTAAACAGAGAATTACAAAGAAAACAGCCGGAATTGGACCCTGCATGCAGATCACGTGTAACTAAAATACAATGCTTGAGAAGGACACTTACTGGACCGTGGTAG 1218 0.4499 MNFRNYGDDPTWDAMQGKTPTNVTLMRQPSVYSLTFDEFQSTMGGIGKDFGSMNMDELLKNIWTAEETQALGFSAGAGEGYNHNPISGGLQRQGSLTLPRTLSQKTVDEVWRDLIKDSGGAKDGSGNDGGSSMPQRQPTLGEMTLEEFLVRAGVVREDVPQQIGKPNNNGSWFGDFHRPNTSTGLLLGFQQPNRSNGNLGERVADGNNNNNSLVTKHPPPLSLNSNHSQRQAQQPPPLFPKPTNVAFAAPMHLLNNGQLASPGRRGGLLGVVDHSMNVGMVSLPNANVTATGASPSCKLSPNVITRSNGDTSSTSPVHYVINRGRKCSAIEKVVERRQRRMIKNRESAARSRARKQAYTFELEAEVAKLKELNRELQRKQPELDPACRSRVTKIQCLRRTLTGPW 405
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca01g00964 405 PANTHER ABSCISIC ACID-INSENSITIVE 5-LIKE PROTEIN 7 18 405 - -
Cca01g00964 405 SUPERFAMILY Leucine zipper domain 336 384 IPR046347 GO:0003700|GO:0006355
Cca01g00964 405 CDD bZIP_plant_BZIP46 336 383 - -
Cca01g00964 405 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 334 383 IPR004827 GO:0003700|GO:0006355
Cca01g00964 405 MobiDBLite consensus disorder prediction 116 138 - -
Cca01g00964 405 Coils Coil 355 379 - -
Cca01g00964 405 Pfam bZIP transcription factor 336 384 IPR004827 GO:0003700|GO:0006355
Cca01g00964 405 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 339 354 IPR004827 GO:0003700|GO:0006355
Cca01g00964 405 SMART brlzneu 332 396 IPR004827 GO:0003700|GO:0006355
Cca01g00964 405 Gene3D - 334 390 - -
Cca01g00964 405 MobiDBLite consensus disorder prediction 190 239 - -
Cca01g00964 405 PANTHER CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED 18 405 IPR043452 GO:0003700|GO:0045893
Cca01g00964 405 MobiDBLite consensus disorder prediction 190 234 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca01g00964 Cca-Chr1 13911842 13914183 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca01g00964 25 405 bZIP Transcription Factor Family AT1G49720 47.561 1.48e-100 302
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Cca01g00964 bZIP_1 5e-12 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca01g00964 K14432 - gmx:100776600 590.112