Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca01g00959 ATGCTGCCTCTATATAAGCCAAGCTTAACTCAAGCGGAACATTCATTGACTCCAATACCCATCAAACCAACACCAACCACTTTCTTTGCGTCATTTCCATATAATCTAAAGACAAGAAGCTGCTACGCAACACTGTGTATGGAGATTTTCGCCATTTTCTTTTGCATTCTCCTCTTCCTCTCGTCCCTTCTCTCCTACCCATTCATAAAGAAACACAAGAAACACGAACTCATACCTAAGCCTAAGCTTCCCCCTGGCTCAATGGGTTGGCCTTACATAGGAGAGACCCTTCAACTCTACTCTCAGGACCCTAACATCTTCTTTGCTTCAAAGCAAAAAAGATATGGAGAAATTTTCAAGACACACATACTAGGTTGTCCATGCGTGATGCTGGCGAGTCCCGAGGCTGCACGGTTTGTGTTGGTGACTCACGCTCACTTGTTCAAACCTACATACCCCAAAAGCAAAGAGAAGCTAATAGGCCCTTCTGCATTGTTCTTTCACCAAGGAGACTACCACACTCGCATCAGAAAGCTCGTGCAAACCTCTCTCTCTCCCGAAACCATCAGAAAACTCATCCCCGACATCCAAAACGAGGTCGTTTCCTCCTTGGAATCGTGGGTTTCCGCTGGACGAGTCATCAGCGCCTTCCAAGAAATGAAAAAGTTCTCTTTCAATATCGGCATCCTCTCTGTCTTTGGTCACTTGGAAGGAAATTATAGAAATCAGCTTAAGGAAAACTACTGCATAGTAGAAAAAGGGTACAATTCTTTCCCAAATAGGATTCCCGGAACTGCATACGCCAAAGCACTCTTGGCAAGGAGAAGAATCAGAGAGATTATAAGTGAGATAATTTGTAAAAGAAAGGAGCAGAGATTGATGGAGAGGGATCTATTAGGCCACTTGCTGAACTACAAGGATGAAAAAGGACAAACGCTAAGTGATGGCCAAATCGCTGATAATGTGATTGGGGTACTATTTGCAGCTCAGGATACTACAGCAAGTGTTCTAACCTGGATTCTCAAGTATCTTCATGATGACCAGAAACTTCTTGAAGCAATAAAAGCAGAGCAAATGGCATTATATGAAGCTAATGAAGGAGGGAAGATGCCATTGACATGGGGTCAGACCAGAAATATGCCAATTACTCATAGGGTGATTTTGGAAAGCCTTAGGATGGCAAGTATCATATCATTTACTTTTAGGGAAGCTGTGGTTGATGTGGTGTACATAGGATATCTTATACCAAAGGGTTGGAAAGTAATGCCACTGTTCAGGAACATCCATCATAATCCAGAATTCCACCCTGCTCCTCACAATTTTGACCCATCAAGGTTTGAGGCTGCTCCAAAGCCCAATACTTTTATGCCATTTGGCAACGGAGTGCACTCTTGTCCAGGAAATGAGCTTGCCAAATTGAACATGCTGGTTTTAATTCATCATCTAGTAACCAAATATAGGTGGGAAGTAGTGGGATATCAGAATGGAATCCAATATAGCCCATTCCCAGTCCCTCTGCATGGTCTACCTACAAGATTTTGGAGAAAGGAATAG 1554 0.4305 MLPLYKPSLTQAEHSLTPIPIKPTPTTFFASFPYNLKTRSCYATLCMEIFAIFFCILLFLSSLLSYPFIKKHKKHELIPKPKLPPGSMGWPYIGETLQLYSQDPNIFFASKQKRYGEIFKTHILGCPCVMLASPEAARFVLVTHAHLFKPTYPKSKEKLIGPSALFFHQGDYHTRIRKLVQTSLSPETIRKLIPDIQNEVVSSLESWVSAGRVISAFQEMKKFSFNIGILSVFGHLEGNYRNQLKENYCIVEKGYNSFPNRIPGTAYAKALLARRRIREIISEIICKRKEQRLMERDLLGHLLNYKDEKGQTLSDGQIADNVIGVLFAAQDTTASVLTWILKYLHDDQKLLEAIKAEQMALYEANEGGKMPLTWGQTRNMPITHRVILESLRMASIISFTFREAVVDVVYIGYLIPKGWKVMPLFRNIHHNPEFHPAPHNFDPSRFEAAPKPNTFMPFGNGVHSCPGNELAKLNMLVLIHHLVTKYRWEVVGYQNGIQYSPFPVPLHGLPTRFWRKE 517
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca01g00959 517 Pfam Cytochrome P450 84 491 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca01g00959 517 SUPERFAMILY Cytochrome P450 80 515 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca01g00959 517 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 458 467 IPR017972 GO:0005506|GO:0016705
Cca01g00959 517 Gene3D Cytochrome P450 73 514 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca01g00959 517 PRINTS E-class P450 group I signature 112 131 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca01g00959 517 PRINTS E-class P450 group I signature 317 334 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca01g00959 517 PRINTS E-class P450 group I signature 384 402 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca01g00959 517 PRINTS E-class P450 group I signature 424 448 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca01g00959 517 PRINTS E-class P450 group I signature 455 465 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca01g00959 517 PRINTS E-class P450 group I signature 465 488 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca01g00959 517 PANTHER CYTOCHROME P450 FAMILY ABA 8'-HYDROXYLASE 54 514 - -
Cca01g00959 517 PRINTS P450 superfamily signature 328 345 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca01g00959 517 PRINTS P450 superfamily signature 385 396 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca01g00959 517 PRINTS P450 superfamily signature 456 465 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca01g00959 517 PRINTS P450 superfamily signature 465 476 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca01g00959 517 PANTHER CYTOCHROME P450 26 54 514 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca01g00959 Cca-Chr1 13616476 13619897 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca01g00959 52 515 Cytochrome P450 AT3G19270 70.815 0.0 697
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca01g00959 K09843 - gmx:100806350 860.522