Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca01g00946 ATGATCGTAACGATGTCGTTTTGGAGCTCCACCTATGTCAAGGACCTCCACTCCGCGCCGTTAGATCTGCAGACCAAGGGTTTGGAAACGTTAGACTCCAGTCATTCAACCAACGGCAATCTCAAATCGTTCAGTGTGTTGAATGAGTTTTCTGGAGACTCGGAAGAATCGACGATGTTTCCGGCGGCGGAGAGCGGGCGTCGGAAAGTGGAGACGCCGCCTTCGGCGGAGATCGAAGAGTTTTTCGCAATGGCTGAAAAGTACGAGCAAAAGCGGTTCGCAGagaaGTACAACTTTGATATCGTTAGAGATATGCCGTTGGAGGGTCGGTACCAGTGGGCCATTTGGAATATCCTCTCCATCCCGAGCTATGATTCCCCTGTTTTCTGTGGGGACCACGTGTGCCTGCCTGCTATTGCTACATAA 426 0.5094 MIVTMSFWSSTYVKDLHSAPLDLQTKGLETLDSSHSTNGNLKSFSVLNEFSGDSEESTMFPAAESGRRKVETPPSAEIEEFFAMAEKYEQKRFAEKYNFDIVRDMPLEGRYQWAIWNILSIPSYDSPVFCGDHVCLPAIAT 141
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca01g00946 141 PANTHER CYCLIN-DEPENDENT KINASE INHIBITOR 4-RELATED 9 114 IPR044275 GO:0004861|GO:0045736|GO:0051726
Cca01g00946 141 Pfam Cyclin-dependent kinase inhibitor 73 113 IPR003175 GO:0004861|GO:0005634|GO:0051726
Cca01g00946 141 PANTHER CYCLIN-DEPENDENT KINASE INHIBITOR 9 114 - -
Cca01g00946 141 Gene3D p27 62 129 IPR044898 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca01g00946 Cca-Chr1 13413671 13415775 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca01g00946 72 113 Core Cell Cycle Gene Families AT1G49620 69.048 1.88e-17 73.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca01g00946 - - vun:114176886 203.371