Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca01g00945 ATGGATTCAACCTCCACCGACAGCGAAGTAGCCTATGACATCCCTCCAATCCTCAAAGTCTACAAAAACGGCCGCATAGAGAGGCTAGCAGGCGTCGAGGTTGTTCCTCCGTCTCTTGACCCCGAAACCAACGTGGAATCCAAAGACGTCGTAATCTCCGAAAAAGACGACATATCCGCCAGGCTTTACATTCCAAAAACCACATACCCCCCGCCGCAAAAGCTCCCTCTCCTTCTCTACTTCCACGGTGGCGCCTTCCTAATCGGAACCCCGTTTTCTCCCAACTCCCACAACTACCTCAACAACGTTGTTTCAAAGGCTAACGTAGTCGCTGTCTCCGTCCACTACAGGAGGGCACCGGAGCACCCGGTTCCCGTCGCCCACCAAGATTCCTGGCTCGCGCTCAAGTGGGTCGCTTCGCATGCGGCCGGAAACGGCCCTGACGGGTGGCTGAACAGCCACGCTGATTTTGCGAAAGTGTTCTTCGCCGGCGACAGCGCCGGCGCCAACATCGCGAGCTATTTAGGCGTTCGGGTCGGGACGGAAGGGTTAAACGGTGTGAACGTTGAAGGGGTTGTTTTGGTGCATCCGTTTTTCTGGGGAGAGGAACCCATTGGGAGTGAGGCGAATCGGCCTGAGCAAGCTAAGAAGATACACGATTTGTGGCGGTTTGCGTGCCCCAGCGCGGGTGGGTCCGACGACCCGATTGTAAACCCGGCTAAGGATCCGAAAGTGGGGAAGTTAGGTTGTGAGAGATTGCTTGTTTGTGTGGCTGAGAAGGATTTGGTGAGGGATAGGGCTTGGTACTATAAAGAGTTGCTTGAAGAAAGTGGGTGGCCTGGAGTTGCGCAAGTGTTGGAGATAAAGGATGAGGACCATGTTTTTCATTTGTTCAAACCCAACAGTGAGAATGCTCATCTTTTGATCGATCAAATTGTTTCCTTTATCAAACAGGCTTGA 960 0.5323 MDSTSTDSEVAYDIPPILKVYKNGRIERLAGVEVVPPSLDPETNVESKDVVISEKDDISARLYIPKTTYPPPQKLPLLLYFHGGAFLIGTPFSPNSHNYLNNVVSKANVVAVSVHYRRAPEHPVPVAHQDSWLALKWVASHAAGNGPDGWLNSHADFAKVFFAGDSAGANIASYLGVRVGTEGLNGVNVEGVVLVHPFFWGEEPIGSEANRPEQAKKIHDLWRFACPSAGGSDDPIVNPAKDPKVGKLGCERLLVCVAEKDLVRDRAWYYKELLEESGWPGVAQVLEIKDEDHVFHLFKPNSENAHLLIDQIVSFIKQA 319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca01g00945 319 SUPERFAMILY alpha/beta-Hydrolases 5 318 IPR029058 -
Cca01g00945 319 ProSitePatterns Lipolytic enzymes "G-D-X-G" family, putative serine active site. 160 172 IPR033140 -
Cca01g00945 319 Gene3D alpha/beta hydrolase 21 319 IPR029058 -
Cca01g00945 319 PANTHER CXE CARBOXYLESTERASE 6 317 - -
Cca01g00945 319 Pfam alpha/beta hydrolase fold 78 296 IPR013094 GO:0016787
Cca01g00945 319 PANTHER ARYLACETAMIDE DEACETYLASE 6 317 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca01g00945 Cca-Chr1 13387272 13392563 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca01g00945 7 317 Carbohydrate Esterase AT3G48690 49.062 9.75e-103 302
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca01g00945 - - gmx:100800733 498.049