Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca01g00943 ATGGACCCAAACCCAAACGCCTCAGAGGTTCTCCACGAGTTCCCTCGCCTCTTCCGCATCTACAAAGACGGCCGCGTAGAGCGCTTCCTCGGCACCGAAACCACCCCTGCCGGCACCGACCCCCCAACCTCCGTCCAATCCAAGGACCTCACCATCAATGCCAACACCGGCGCCGCCGTCCGCCTCTACATCCCCCCCAACGCCGCCGGAAAGAAGCTCCCCCTCCTCATCTACATCCACGGCGGCGCCTTCTGCGTCTGCACCCCCTTCAACCCCGCCTACCACCACCACCTCAAcgccgtctccgcctccgccaacgtcgtcgtcgtctccgtccactaccgcctcgccccggaggaccccctccccgccgccTACGACGACTCCTGGGAGGCCGTCAAGTGGGCCGCCTCCCACGCCAGCGGCGCCGGCCCCGAGCCCTGGCTGAACGACCACGCCGATCCCTCCACCGTCTTCTTCGCCGGCGACAGCGCCGGCGGCAACATCGCCCACAACATGGTGATGCAGGGCACCGAGGAGGGCTTCGGCGGGTTGAAGGTTGAAGGGATGGTGCTGCTTCACCCTTACTTTGGTGCCGACAAAAAGGACGAGCTTGTGGCGTTTCTCTACCCCGCTTACGATGGACCCAGCAACCCCAAGATTCACTCCCCCATGGATCCAAAGCTTTCCACTTTGGCCTGCCCCAGGGTTCTGATCTTCGTCTCCGAGAAGGACTTTCTGAGGGAGAGAGGGTGCAACTACTACGAGGCCCTCAAGAACAGCAACTGGAGTGGCAAGGTCGACATCGTGGAGTTCTCCGGAGAGGATCACGTCTTTCACTTGTTCGATCCCACTAAGGAAAACTCTCTGTCCCTCATGTCGCAGTTTGTCGCTTTCTTGAAGCAGGGTAGAGCTTGA 918 0.5556 MDPNPNASEVLHEFPRLFRIYKDGRVERFLGTETTPAGTDPPTSVQSKDLTINANTGAAVRLYIPPNAAGKKLPLLIYIHGGAFCVCTPFNPAYHHHLNAVSASANVVVVSVHYRLAPEDPLPAAYDDSWEAVKWAASHASGAGPEPWLNDHADPSTVFFAGDSAGGNIAHNMVMQGTEEGFGGLKVEGMVLLHPYFGADKKDELVAFLYPAYDGPSNPKIHSPMDPKLSTLACPRVLIFVSEKDFLRERGCNYYEALKNSNWSGKVDIVEFSGEDHVFHLFDPTKENSLSLMSQFVAFLKQGRA 305
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca01g00943 305 PANTHER ARYLACETAMIDE DEACETYLASE 6 302 - -
Cca01g00943 305 SUPERFAMILY alpha/beta-Hydrolases 8 302 IPR029058 -
Cca01g00943 305 Pfam alpha/beta hydrolase fold 76 280 IPR013094 GO:0016787
Cca01g00943 305 ProSitePatterns Lipolytic enzymes "G-D-X-G" family, putative serine active site. 158 170 IPR033140 -
Cca01g00943 305 PANTHER CARBOXYLESTERASE 2-RELATED 6 302 - -
Cca01g00943 305 Gene3D alpha/beta hydrolase 17 303 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca01g00943 Cca-Chr1 13367619 13369184 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca01g00943 8 301 Carbohydrate Esterase AT3G48700 41.667 3.12e-81 247
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca01g00943 - - gmx:100800199 461.07