Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca01g00927 ATGACTATTAAACTTGTAATCTTCTTCACTTTCTTCTTTGTTCCTTTTGTTCATATGTTTCCCTACGTGCGTACAGGCCAGCTTGACTTCAATTTCTACGATGATTCATGCCCCAATTTGCTCAGGATTGTTAGAAATGTTGTTTGGTCAAGCATAAGATATGACAACAGAATGGCCGCGTCCCTCCTTCGGTTGCACTTTCACGATTGCATAGTTAATGGCTGTGATGCTTCTGTGCTTCTTGATGATACACGATATTTCACAGGGGAAAAGAATGCTTTACCTAATCGTAATTCACTTCGCGGATTTGAAGTGATTGATAACATAAAAGATCTCGTTGAAAGGCAATGTCCATCAACAGTCTCCTGCGCTGATATATTAACCTTAGCCGCTAGGGAAGCTATTGATCTGGTTGGTGGGCCTTCTTGGCCTGTTGCATTAGGCCGAAGAGATGCAGTAACAACCAGTCAGACTGCAGCTGATCAACAAATTCCCTCACCAATCGAACCTCTAGAAAACATCATTGCAAAATTTGTTTCAAAGGGTCTTGAAATAAGGGATGTTGTAGCCCTTTCAGGAGGACACACAATTGGTTTTGCTCAATGCTTCACATTCAAAAGGAGACTTTTTGACTTTAAAGGCTCTGGCAGACCTGATCCCTTGCTTGACAATTTTCTTCTCTCAAAATTACAAAATATATGTCCAAACAGAGACGCTTCAAACAGAAATTTAGCACCTCTTGATGCTACAACTAATTTGATGTTCGACAATGAATATTATAGAAATCTCGTATATAACACAGGGCTGCTAGAATCTGACCAGGCATTAATTATGGATCGAAGGACTTCTGGTTTGGTTTATTATTACAGCAACAACCAAAATTCCTTCTATAATGATTTTGCCGAATCCATGGTGAAGCTTAGTAATGTGGGAGTACTTACAGGAATGAAAGGGCAAATTAGAAAGAAATGTGGCTCAGTAAACTAA 987 0.3951 MTIKLVIFFTFFFVPFVHMFPYVRTGQLDFNFYDDSCPNLLRIVRNVVWSSIRYDNRMAASLLRLHFHDCIVNGCDASVLLDDTRYFTGEKNALPNRNSLRGFEVIDNIKDLVERQCPSTVSCADILTLAAREAIDLVGGPSWPVALGRRDAVTTSQTAADQQIPSPIEPLENIIAKFVSKGLEIRDVVALSGGHTIGFAQCFTFKRRLFDFKGSGRPDPLLDNFLLSKLQNICPNRDASNRNLAPLDATTNLMFDNEYYRNLVYNTGLLESDQALIMDRRTSGLVYYYSNNQNSFYNDFAESMVKLSNVGVLTGMKGQIRKKCGSVN 328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca01g00927 328 PANTHER PEROXIDASE 72-RELATED 12 327 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cca01g00927 328 Gene3D - 31 328 - -
Cca01g00927 328 PRINTS Haem peroxidase superfamily signature 59 73 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cca01g00927 328 PRINTS Haem peroxidase superfamily signature 248 263 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cca01g00927 328 PRINTS Haem peroxidase superfamily signature 121 138 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cca01g00927 328 PRINTS Haem peroxidase superfamily signature 139 151 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cca01g00927 328 PRINTS Haem peroxidase superfamily signature 187 202 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cca01g00927 328 PRINTS Plant peroxidase signature 101 114 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cca01g00927 328 PRINTS Plant peroxidase signature 120 130 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cca01g00927 328 PRINTS Plant peroxidase signature 61 81 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cca01g00927 328 PRINTS Plant peroxidase signature 37 56 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cca01g00927 328 PRINTS Plant peroxidase signature 139 154 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cca01g00927 328 PRINTS Plant peroxidase signature 262 279 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cca01g00927 328 PRINTS Plant peroxidase signature 186 198 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cca01g00927 328 PRINTS Plant peroxidase signature 246 261 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cca01g00927 328 PRINTS Plant peroxidase signature 302 315 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cca01g00927 328 PANTHER PEROXIDASE 10 12 327 - -
Cca01g00927 328 ProSitePatterns Peroxidases proximal heme-ligand signature. 187 197 IPR019793 -
Cca01g00927 328 ProSitePatterns Peroxidases active site signature. 59 70 IPR019794 GO:0004601
Cca01g00927 328 SUPERFAMILY Heme-dependent peroxidases 27 328 IPR010255 GO:0004601|GO:0006979|GO:0020037
Cca01g00927 328 ProSiteProfiles Plant heme peroxidase family profile. 27 328 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cca01g00927 328 CDD secretory_peroxidase 27 327 IPR033905 GO:0004601|GO:0042744
Cca01g00927 328 Pfam Peroxidase 44 292 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cca01g00927 328 Gene3D Peroxidase, domain 2 165 307 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca01g00927 Cca-Chr1 13137454 13142700 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca01g00927 3 325 Peroxidase AT1G49570 56.973 1.69e-135 387
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca01g00927 K00430 - gmx:100812961 507.679