Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca01g00924 ATGATAATAATGAGAGAGTTGAGCTTCTTGTTGGGTGATGCAAAAAGTGTTCTTTTCTTTTTCTTTCTTAAGCACATGGATCGGTCTGCTATGACTGTTGGGCCGGGAATGGATTTGCCGATCATGCATGACAGTGATCGCTATGAACTTGTGCGTGACATTGGTTCTGGCAACTTCGGAGTAGCCAGGCTTATGAGGGACAGGCACACCGAGGAACTTGTTGCTGTTAAGTATATTGAGAGAGGTGAAAAGATAGATGAAAATGTACAAAGGGAAATTATAAATCACAGATCACTGAGGCATCCCAATATAGTCAGGTTCAAGGAGGTTATTTTGACCCCAAGCCATTTGGCAATTGTGATGGAATATGCTTCTGGAGGAGAGCTATTTGAGCGAATATGCAATGCTGGGCGGTTCAGTGAGGATGAGGCACGATTCTTCTTCCAACAACTTATATCAGGGGTTAGCTACTGTCATGCAATGGAAGTATGCCATCGTGATTTGAAGTTGGAAAACACATTGTTGGATGGTAGTCCAGCTCCTCGTTTGAAGATTTGTGATTTTGGTTATTCCAAGTCCTCGGTACTACATTCACAACCAAAATCTACAGTTGGAACCCCTGCATATATAGCTCCAGAAGTTTTGCTTAAAAAGGAATATGATGGCAAGATTGCGGATGTGTGGTCTTGTGGGGTGACCTTATATGTCATGTTGGTGGGTGCGTACCCTTTTGAGGATCCAGAGGAACCTAAAAATTTCCGCAAGACAATTCATAGAATTTTGAATGTTCAGTATTCAATCCCTGACTATGTTCATATATCAGCCGAGTGCCGTCATCTGATATCAAGGATTTTTGTTGCTGATCCTGCAAAGAGAATAAATATTCCTGAGATTAGAAACCACGAGTGGTTTTTGAAGAACCTTCCGAGTGATCTCATGGATGGGAATACTAACAACCAGTTTGAGGAGCCTGATCAACCAATGCAAAGCATAGAAGAAATCATGCAGATAATTAAGGAGGCTACAATTCCTGCAGCTGGATCTCAGTCTCTCAACCATGATCTCACTGGTAGTTTGGATATTGATGATGACATGGATTCGGATCCTGAACTTGACTTAGACAGCAGTGGAGAAATAGTGTATGCTATGTAA 1152 0.4184 MIIMRELSFLLGDAKSVLFFFFLKHMDRSAMTVGPGMDLPIMHDSDRYELVRDIGSGNFGVARLMRDRHTEELVAVKYIERGEKIDENVQREIINHRSLRHPNIVRFKEVILTPSHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHAMEVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLLKKEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILNVQYSIPDYVHISAECRHLISRIFVADPAKRINIPEIRNHEWFLKNLPSDLMDGNTNNQFEEPDQPMQSIEEIMQIIKEATIPAAGSQSLNHDLTGSLDIDDDMDSDPELDLDSSGEIVYAM 383
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca01g00924 383 Gene3D Transferase(Phosphotransferase) domain 1 124 312 - -
Cca01g00924 383 Pfam Protein kinase domain 48 304 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca01g00924 383 SUPERFAMILY Protein kinase-like (PK-like) 40 319 IPR011009 -
Cca01g00924 383 Gene3D Phosphorylase Kinase; domain 1 26 123 - -
Cca01g00924 383 PANTHER SERINE/THREONINE-PROTEIN KINASE SRK2E 38 378 - -
Cca01g00924 383 SMART serkin_6 48 304 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca01g00924 383 CDD STKc_SnRK2-3 47 303 - -
Cca01g00924 383 ProSitePatterns Serine/Threonine protein kinases active-site signature. 163 175 IPR008271 GO:0004672|GO:0006468
Cca01g00924 383 ProSiteProfiles Protein kinase domain profile. 48 304 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca01g00924 383 PANTHER SERINE/THREONINE KINASE 38 378 - -
Cca01g00924 383 ProSitePatterns Protein kinases ATP-binding region signature. 54 77 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca01g00924 Cca-Chr1 13041652 13055715 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca01g00924 41 314 CBL-interacting serine-threonine protein kinases AT4G24400 43.463 7.13e-69 221
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_OST1L Cca01g00924 Pkinase 2.1e-71 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca01g00924 K14498 - gmx:100796253 685.256