Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cca01g00905 | ATGATAGCCAGCTCCTTCTGCAATGCTGATTCTATGTTCTCAAGAGAAGAGGGGATGGATGTTAGAAAGATGATGGAACATAAAAGGAGTCCCTGCTCTGTTGACCAAAGCAGTTACACTTCTATTGCATCTAAAAGGCAAAAGGCTGATTTATCGATCAGCTCTAAGGAGAGAAAGGAGAAGATTGGTGAGCGAATTGTTGCTCTTCAGCAGCTTGTTTCACCATATGGAAAGACAGATACATCTTCTGTTCTAAAGGAGGCAATGGATTACATAGGATTCCTTCATAAACAAGTTAAGCTGCTAAGTGCTCCATACCTTGAAAGTTCACCAGCAGTCAAGATGCAGGGTATGGAGCCATGCAGCCTGAGGAGTAGAGGGTTATGTCTTGTTCCTGTCTCAATTACAATGGGAGTTGCTGAGAGCAATGGTGCAGATATCTGGGCTCCCATTAAGACTACTACTTCGCCTAAGTTTGAGAATGATGTCTCGCAATTTCATTGA | 504 | 0.4286 | MIASSFCNADSMFSREEGMDVRKMMEHKRSPCSVDQSSYTSIASKRQKADLSISSKERKEKIGERIVALQQLVSPYGKTDTSSVLKEAMDYIGFLHKQVKLLSAPYLESSPAVKMQGMEPCSLRSRGLCLVPVSITMGVAESNGADIWAPIKTTTSPKFENDVSQFH | 167 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cca01g00905 | 167 | PANTHER | TRANSCRIPTION FACTOR BHLH113-LIKE ISOFORM X1 | 13 | 150 | - | - | |
Cca01g00905 | 167 | CDD | bHLH_AtbHLH_like | 52 | 103 | IPR045239 | - | |
Cca01g00905 | 167 | Gene3D | - | 43 | 114 | IPR036638 | GO:0046983 | |
Cca01g00905 | 167 | ProSiteProfiles | Myc-type, basic helix-loop-helix (bHLH) domain profile. | 46 | 95 | IPR011598 | GO:0046983 | |
Cca01g00905 | 167 | PANTHER | TRANSCRIPTION FACTOR BHLH83-RELATED | 13 | 150 | - | - | |
Cca01g00905 | 167 | SUPERFAMILY | HLH, helix-loop-helix DNA-binding domain | 47 | 110 | IPR036638 | GO:0046983 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Cca01g00905 | Cca-Chr1 | 12684881 | 12689319 | Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Cca01g00905 | 24 | 159 | Basic Helix-Loop-Helix Transcription Factor Gene Family | AT1G05710 | 55.696 | 4.87e-54 | 167 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cca01g00905 | - | - | gmx:100527660 | 317.39 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Cca01g00905 | 01 | 12684881 | 12689319 | Cca01g00905 | 01 | 12684881 | 12689319 | ECH |