Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca01g00854 ATGAAGAAGGTTCCGAAGAACAGCTGCAAGTCTGTATCACACAGGCTCTTTAAGGACAAGGCAAAGAACCGTGTGGATGACCTGCAGGTGATGTTCCTGGATCTGCAGTTTGCTAGGAAGGAAAGCCGCACGGTTGATGCTGCAGTGCTTGAGGAACAAGTCCATCAAATGCTTCGCGAGTGGAAGGCCGAGCTCAACGAGCCCTCGCCTGCTTCCTCGCTGCAGCAAGGTGGCAGCCTTGGGTCATTCTCCACCGATATCTGCCGGCTATTGCAGCTTTGTGAGGAGGAAGATGATGCCTCTAGTCCGTTAGCTGCTCCCAAGTCTGAACCTAATGATCAGACTCTGCAGGCTGGGGGTAAGGTCATGTTCCAAGAGGGCCAACAGCAACATGATTTTCCATTGGTTGATGAGTGCAAACACTCCACCTCAAGTGTTCAAAATGTGGCAGCTAACAATCCGGGTGGGCATGCTTTAGAGTATCATCAGTTTGATATGCATCAGGAATATGATAATGGCTTTTATACTGGTTTTAATGGTACAAGTTATTGTGAGGAGGATGCTATTCCTCATATATCTAGCTACCTACCAAGTATCTGCCCTCCTCCTTCGGCTTTCTTAGGCCCAAAATGTGCTCTTTGGGACTGTCCAAGGCCTGCACAAGGGTTGGACTGGTGTCAAGACTATTGCAGTAGCTTTCATGCTGCCCTAGCTTTGAATGAAGGGCCACCAGGTATGGCCCCAGTTCTACGACCTGGAGGCATTGGTTTGAAGGATAATTTACTTTTTGCTGCTCTTAGTGCAAAGGCACAAGGAAAAGATGTTGGCATCCCAGAATGTGAAGGAGCAGCAACTGCAAAGTCTCCATGGAATGCGCCTGAGCTCTTTGATCTGTCTGTTCTTGAGGGTGAGACTATTAGGGAGTGGCTCTTCTTTGATAAGCCGCGAAGAGCATTTGAGAGTGGAAACAGAAAGCAAAGGTCGTTGCCAGATTATAGTGGACGTGGTTGGCATGAATCCAGAAAGCAAGTGATGAATGAATTTGGAGGGCTGAAGAGATCCTATTATATGGATCCACAGCCACTGAACCATTTTGAGTGGCACCTTTATGAATACGAGATTAGCAAGTGCGATGCTTGTGCCCTGTACCGATTGGAACTGAAGCTTGTTGATGGTAAGAAGAACTCCAAGACAAAGGTCCCAAATGATTCAGTTGCTGATCTGCAGAAGCAGATGGGAAGGCTCTCTGCTGAGTTTCCACCTGACAACAAAAGGGCTGCCAAAGGCAGATCGAAAATTAATGCCAAAGTTGGCATAGGTGGTGTCTATTCAGCTTCTCACAGGGTGGCTCCACTGAATGGAACATACGAGTATGGTTTGGCTACACCATATGACTATCTTGTTGAGAACATGGGCGACTACTATGGGACATGA 1434 0.4763 MKKVPKNSCKSVSHRLFKDKAKNRVDDLQVMFLDLQFARKESRTVDAAVLEEQVHQMLREWKAELNEPSPASSLQQGGSLGSFSTDICRLLQLCEEEDDASSPLAAPKSEPNDQTLQAGGKVMFQEGQQQHDFPLVDECKHSTSSVQNVAANNPGGHALEYHQFDMHQEYDNGFYTGFNGTSYCEEDAIPHISSYLPSICPPPSAFLGPKCALWDCPRPAQGLDWCQDYCSSFHAALALNEGPPGMAPVLRPGGIGLKDNLLFAALSAKAQGKDVGIPECEGAATAKSPWNAPELFDLSVLEGETIREWLFFDKPRRAFESGNRKQRSLPDYSGRGWHESRKQVMNEFGGLKRSYYMDPQPLNHFEWHLYEYEISKCDACALYRLELKLVDGKKNSKTKVPNDSVADLQKQMGRLSAEFPPDNKRAAKGRSKINAKVGIGGVYSASHRVAPLNGTYEYGLATPYDYLVENMGDYYGT 477
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca01g00854 477 PANTHER TRANSCRIPTION FACTOR VOZ1 1 477 - -
Cca01g00854 477 PANTHER TRANSCRIPTION FACTOR VOZ1 1 477 IPR039277 GO:0006355|GO:0048578
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca01g00854 Cca-Chr1 11804990 11810592 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca01g00854 3 475 VOZ-9 Transcription Factor Family AT1G28520 71.079 0.0 696
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF VOZ Cca01g00854 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca01g00854 - - gmx:100798565 946.421