Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca01g00831 ATGGATTCTGACTTCTGGACCTCGCGTCTTGCTGCCGCTAAACGCCAATACACGCTTCAGCATCACCATCCAAATTCTCACTTAGATCGGTTGGGAATCGATGATTTTGATGTGGAAGAAGAGGTGCGACCCGATTTCCCTTGCCCGTACTGTTATGAAGACTTTGACATCGCCTCCTTGTGTTCTCATCTTGAAGAGGAACATTCTTGTGAATCAAGAGTCACGATTTGTCCTATATGCTCCGTTAAAGTTGCCCGGGACATGTTAAGTCACATAACGCAGCAACATGGGCACTTATTTAAGATACAGAGAAGGCGCAGGTTAAGAAGAGTTGCTATTCCAAACAGTCAGACATTGTCTCTTTTGGGTCGAGATCTTCGTGAGGCTCATCTACAGGTGCTTCTtggtggtagtggtggtggtggATACCGGTCAAACAATGCAACTGTGTCTAATGCTGCTACTGATCCATTCCTATCCTCATTTATTTTGAATTTCCCTGCTTGTGAAGCAGAAGAAATTTCAAAATCTGTGGTAACAAGTGCTGAGGATCCTTCTGCCAAAAATGCAACACCTCAACATATTTGGAAATCAAGTTTTGATCCCTCCTTGAGTACTGAAGAGCGGGAGAAAAGGATGAGACAAGCTGCTGGAAGATCCGGTTTTGTGCAGGACTTGTTTCTTTCGACTTTGTTAGGAGACTAA 705 0.4255 MDSDFWTSRLAAAKRQYTLQHHHPNSHLDRLGIDDFDVEEEVRPDFPCPYCYEDFDIASLCSHLEEEHSCESRVTICPICSVKVARDMLSHITQQHGHLFKIQRRRRLRRVAIPNSQTLSLLGRDLREAHLQVLLGGSGGGGYRSNNATVSNAATDPFLSSFILNFPACEAEEISKSVVTSAEDPSAKNATPQHIWKSSFDPSLSTEEREKRMRQAAGRSGFVQDLFLSTLLGD 234
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca01g00831 234 MobiDBLite consensus disorder prediction 184 207 - -
Cca01g00831 234 MobiDBLite consensus disorder prediction 184 202 - -
Cca01g00831 234 PANTHER PROTEIN DEHYDRATION-INDUCED 19 1 233 - -
Cca01g00831 234 SUPERFAMILY TRAF domain-like 46 106 - -
Cca01g00831 234 Pfam Drought induced 19 protein (Di19), zinc-binding 45 97 IPR008598 -
Cca01g00831 234 PANTHER PROTEIN DEHYDRATION-INDUCED 19 1 233 IPR033347 -
Cca01g00831 234 Pfam Stress-induced protein Di19, C-terminal 119 231 IPR027935 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca01g00831 Cca-Chr1 11209533 11213142 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Cca01g00831 Di19_C 3.7e-36 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca01g00831 - - gmx:100792230 415.616