Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca01g00772 ATGACTTCAACGCCTAGCCTCGCCGCCGCCGCTTTTCCGTTTCGCTCCTCTTCCTCCGCCGTTCCCCGCCGCACTTCGCGAGACGCGTCGCCGACGGAGATAAAATCAGCGTACCGTAGCCTCGCGAAGCTCTACCATCCCGACGCGTCGGTGAGGCGGTCGCCGGAGATCGACGGCGACGTCGGCGGCGGAGACTTCATTCTGATTCGGAACGCGTACGAGACGCTGTCGGATCCTTCGGCGAGGGCGACGTACGATATGACGCTGGCGGCGGCGCAGAGCGGGAGACTCCGCCGGTGTCCGGTGCCATTGAGTCGGAGCCGGTCGCCGGTGTTTTACGCGACGCGGAGATGGGAAACGGACCAATGCTGGTAG 375 0.6507 MTSTPSLAAAAFPFRSSSSAVPRRTSRDASPTEIKSAYRSLAKLYHPDASVRRSPEIDGDVGGGDFILIRNAYETLSDPSARATYDMTLAAAQSGRLRRCPVPLSRSRSPVFYATRRWETDQCW 124
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca01g00772 124 Pfam DnaJ domain 26 86 IPR001623 -
Cca01g00772 124 SUPERFAMILY Chaperone J-domain 26 89 IPR036869 -
Cca01g00772 124 PANTHER CHAPERONE PROTEIN DNAJ 11, CHLOROPLASTIC-LIKE 24 124 - -
Cca01g00772 124 ProSitePatterns Nt-dnaJ domain signature. 66 85 IPR018253 -
Cca01g00772 124 SMART dnaj_3 26 81 IPR001623 -
Cca01g00772 124 Gene3D DnaJ domain 12 96 IPR036869 -
Cca01g00772 124 ProSiteProfiles dnaJ domain profile. 14 89 IPR001623 -
Cca01g00772 124 PRINTS DnaJ domain signature 38 53 IPR001623 -
Cca01g00772 124 PRINTS DnaJ domain signature 61 81 IPR001623 -
Cca01g00772 124 PRINTS DnaJ domain signature 20 38 IPR001623 -
Cca01g00772 124 CDD DnaJ 26 78 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca01g00772 Cca-Chr1 10226999 10227644 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca01g00772 26 86 C2H2 Transcription Factor Family AT1G74250 40.984 3.21e-07 45.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca01g00772 - - ccaj:109801114 205.297
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca01g00772 01 10226999 10227644 Cca05g02059 05 40335930 40336663 PCT