Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca01g00771 ATGGAGACTCCAGTTGAAGTGATACCTACTCGTGTTGCATCCGGATTCGTAGATGACTTGTCTGAGACTTGCAAGATGGGTTCTCCAAATGGAAGAGCAATGCATAACTCTGACGATGAAGTTCCTCTTGACTCCGAAATGAATTTTCACCTTTCAGAATCTGGTCTGGTGGATGCTCATGGATCACGTCCTGGAGAATCTTGGACTGCTCATCGAGAAACGTTTTGGTGTAATATTTGCAGGAGCATACAAGTTGTAGTTTTCTCTAACAAACTCAACTTGCTTATGCCTTTTGGGCCTCTTGCAATTCTTGTGCAGAAGTTTACGGGTCATCTTGGTTGGGTCTTCGGTCTGAGTTTGTTGGGTATAATGCCTCTGGCGGAGCGGTTAGGTTATGCTACCGAGCAGCTTGCATTTTACACCGGAGATACTGTTGGGGGTCTTTTAAATGCTACATTTGGAAATGCAACTGAATTGATCATCTCAATATATGCACTGAAAAATGGAATGACACGTGTTGTCCAGCTCTCTTTGCTGGGTTCAATTTTGTCCAATATGTTGCTAGTGCTTGGATGTGCATTCTTATGTGGAGGGATTGTTTTTAATAAGAAGGAACAAGTGTTTAACAAGGCAAGTGCTTCTGTGAACTCAGGATTATTGCTGATGGCAGTCATGGGCATACTTTTTCCTGCTGTTCTACACTACACACACACTGAGGTCCACGTTGGGAAGTCAGAGTTATCACTTTCAAGATTCAGCAGCTGCATCATGCTGGTGGCCTATGCTGCATACCTATTTTTTCAGTTAAAAAGTCAAAGAAATCTCTACGTCTCTGTGAACGAGGAAGAGGGTCAGAATGGAAACAACTCAAATGATGATGAATCTCCAAATATTTCTAAATGGGAATCTATAATCTGGCTTTCGGTTATGACTGCTTGGATATCAATCCTGTCAGAATATTTGGTTGGCGCTATAGAGGGAGCATCTAGTGCATGGGAAATTCCAGTAGCATTTATTAGTGTCATATTGCTTCCACTAGTGGGGAATGCAGCTGAACATGCCAGTGCTATAATGTTTGCCATGAAAGATAAACTCGACATTTCCTTAGGAGTAGCAATAGGTTCATCCACGCAGATATCGATGTTTGTGATACCATTTTGTGTTGTTATTGGCTGGATAATGGGGCACCCTATGGACTTAAACTTTCAACTTTTTGAGACTGCAGCACTATTTCTTACTGTTATAGTCGTAACCTTCATGTTACAGGAAGGAACTGCTAATTACTTCAAAGGACTAATGCTTATTCTTTGCTATCTGATAGTGGCAGCCACTCAACTAGCAGTTTTGTTCCTCTCCTTGGGATTAATTTCCATTGGAGCTGGTTGTGTCAGACCTTGTTCCATAGCCATTGGAGCATATCAACTGGCAATTAAAGACAAATCTAATGATGAGAGGCTCTTGGATAGCTACTTTAATTGGTATTATGCCTTAATTGGAATATCAACCGTGATTTCATTGAGTGTAATTGTGTACATTCAAGTAAATGTGGGATGGAAAATTGGGTTTGGAGTACTTGCTGTGCTAATGTTCATATCAGCTATTCTCAATCTCTTTGGAATAACGACCCTCTCAGCCAACCATTGCACCAATTCATCAGAATCACGGGGGTTACACCAAGTTGCAAATTGCTACAAATGGAATAACTTCTTTTCTTCTGTGGCTTCTCACTTTCTCACACCTGAAATCAGCTTGTAA 1755 0.4114 METPVEVIPTRVASGFVDDLSETCKMGSPNGRAMHNSDDEVPLDSEMNFHLSESGLVDAHGSRPGESWTAHRETFWCNICRSIQVVVFSNKLNLLMPFGPLAILVQKFTGHLGWVFGLSLLGIMPLAERLGYATEQLAFYTGDTVGGLLNATFGNATELIISIYALKNGMTRVVQLSLLGSILSNMLLVLGCAFLCGGIVFNKKEQVFNKASASVNSGLLLMAVMGILFPAVLHYTHTEVHVGKSELSLSRFSSCIMLVAYAAYLFFQLKSQRNLYVSVNEEEGQNGNNSNDDESPNISKWESIIWLSVMTAWISILSEYLVGAIEGASSAWEIPVAFISVILLPLVGNAAEHASAIMFAMKDKLDISLGVAIGSSTQISMFVIPFCVVIGWIMGHPMDLNFQLFETAALFLTVIVVTFMLQEGTANYFKGLMLILCYLIVAATQLAVLFLSLGLISIGAGCVRPCSIAIGAYQLAIKDKSNDERLLDSYFNWYYALIGISTVISLSVIVYIQVNVGWKIGFGVLAVLMFISAILNLFGITTLSANHCTNSSESRGLHQVANCYKWNNFFSSVASHFLTPEISL 584
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca01g00771 584 PANTHER VACUOLAR CALCIUM ION TRANSPORTER 29 444 IPR004713 GO:0006812|GO:0008324|GO:0016021
Cca01g00771 584 PANTHER VACUOLAR CATION/PROTON EXCHANGER 2 29 444 - -
Cca01g00771 584 Pfam POT family 444 541 IPR000109 GO:0016020|GO:0022857|GO:0055085
Cca01g00771 584 SUPERFAMILY MFS general substrate transporter 432 541 IPR036259 -
Cca01g00771 584 TIGRFAM caca2: calcium/proton exchanger 81 444 - -
Cca01g00771 584 Gene3D - 141 282 IPR044880 -
Cca01g00771 584 TIGRFAM cax: calcium/proton exchanger 96 443 IPR004798 GO:0006816|GO:0015369
Cca01g00771 584 Gene3D MFS general substrate transporter like domains 405 578 IPR036259 -
Cca01g00771 584 Pfam Sodium/calcium exchanger protein 304 446 IPR004837 GO:0016021|GO:0055085
Cca01g00771 584 Pfam Sodium/calcium exchanger protein 112 269 IPR004837 GO:0016021|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca01g00771 Cca-Chr1 10179951 10194796 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca01g00771 78 444 Antiporters AT1G55730 77.384 0.0 585
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca01g00771 K07300 - gmx:100799276 790.03