Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca01g00736 ATGGAACCAGACTGGAGCACTCGCCAAACGTTTGATCGTTACGTGTATGATTATCTTGTCAAAAGAAACATGCAACACACTGCTGAGGTTTTCAGGAAGGAGGTCGATCTTCAGATGGATCCCGATGCTCCTTCAAGTGATGCAATGGATGTACCAGAAGGATTTTTGCTGGAGTGGTGGTCACTCAACTATGATGTTGGCTTCTTTAGAGAACGGGTGCAAGTGCATGACACACATGGCCAAGAAGCCACACAAGGATATAATGCTTCTCAAGAAGCAGGGAATTCCATGAATGAAGAAATGAATCAGCTGCCTGATGAATTTACTCCTGTTGAAGCATTCAGCATAGGGAACAACTCAATAGAATCACATGTAACTGATGAATTACCTTTACTTTTTTTACCATCTTCACATCGAGAAGTGAGTGGTGAATTGTCACACCTTCTCTCGCCATCATTGCATCAACAAAAAAGTGGTGAATTGCCACAACTTTCATTGCCCTCTTCACATCAAGAGGAATTGCCAACATCTGCAGTGGGAACAGTGGATGTGACCAAACCAAATGATCCAGAAGCAGAAGCTTTTGAGAAGGACACATCAAAAGCTGAATATACTGCATTCACTGAGGAAACAGATCCAGTGATTGAGAACTTATTAAATTCATTCTGGTTGTTTGAACAAGAAATGCCAAATCTATTTGACATATCAACTGTAGGAGAGAGCAGCAGAAATATGGAGGAGAATTTGCTGCCAAGAGATGAAGGAAACACTGGGATGAATGAATTTGCTGGTTCACCTGTACCGAAGGATGATGATACCAAAAGTGAAACAAGTGATTGTTCCAGCCATTTCCGAATCATTACTACTGACACAGATGCTTCAATGGCAAGGAGCAATTGTCAGCAACAGAGGTGTCCAAGCTAA 924 0.4188 MEPDWSTRQTFDRYVYDYLVKRNMQHTAEVFRKEVDLQMDPDAPSSDAMDVPEGFLLEWWSLNYDVGFFRERVQVHDTHGQEATQGYNASQEAGNSMNEEMNQLPDEFTPVEAFSIGNNSIESHVTDELPLLFLPSSHREVSGELSHLLSPSLHQQKSGELPQLSLPSSHQEELPTSAVGTVDVTKPNDPEAEAFEKDTSKAEYTAFTEETDPVIENLLNSFWLFEQEMPNLFDISTVGESSRNMEENLLPRDEGNTGMNEFAGSPVPKDDDTKSETSDCSSHFRIITTDTDASMARSNCQQQRCPS 307
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca01g00736 307 MobiDBLite consensus disorder prediction 249 286 - -
Cca01g00736 307 ProSiteProfiles LIS1 homology (LisH) motif profile. 7 39 IPR006594 GO:0005515
Cca01g00736 307 PANTHER TRANSCRIPTIONAL REGULATOR OF FILAMENTOUS GROWTH FLO8 5 161 IPR044716 GO:0003714
Cca01g00736 307 MobiDBLite consensus disorder prediction 153 183 - -
Cca01g00736 307 Pfam LisH 12 34 IPR006594 GO:0005515
Cca01g00736 307 MobiDBLite consensus disorder prediction 153 198 - -
Cca01g00736 307 SMART Lish 7 39 IPR006594 GO:0005515
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR LUG Cca01g00736 LisH 3e-08 CL0561
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca01g00736 - - ccaj:109805542 620.157