Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca01g00722 ATGGACACACCCGTTCTCTTGACCCTAGCAGCTACTCTCCTATCAGCATATTTCCTTTGGTTCCTCCTCTTGGCTCGAACCCTATCCGGCCCAAAAGCATGGCCACTGCTTGGCAGCGTTCCAAGCATGATCGTGAACCGCAATCAGGTTCACGACTTTCTGGCTGCCAACCTGCGCAACACGCTGGGTACTTACCAGACCTGCATCCTCCCTTTTCCTCTCGTCGCACGAAAGGAGGGCTTCTTCACCGTCACCAGCAACCCTAGAAACATCGAACACGTCCTCAAGACGCGCTTCGATAACTACCCCAAAGGCCCGCACTGGCAGGCCGCATTCCACGACCTCCTTGGCCATGGCATCTTCAACAGCGACGGCGACACCTGGCTCATGCAGCGGAAAACCGCCGCTCTCGAGTTCACCACTAGAACCCTAAGACAGGCCATGGCTAGGTGGGTCAACCGGACCATAAAGAACCGCTTATGGTGCATTTTGGACAAAGCGGTTAAGGGAAAGCTTTCGGTGGATTTGCAGGACCTTCTTTTGCGTTTGACGTTTGATAACATATGTGGACTCACCTTTGGTAAAGACCCTCAAACTCTCTCCCCGGATCTACCCGAAAACACCTTCACTGTTGCGTTTGACTCTGCCACAGAAATCACCTTGCAAAGGCTTCTGTACCCTGGCATACTATGGAAGTTCCAGAAGCTTCTAAGCATTGGCAAGGAGAGAAAAATGCAGCAAAGTTTGAAGATAGTCGAAACTTACATGAACGAAGCCATTTCAGCTCGGGAGAAGTCTCCCTCCGACGACTTGCTATCAAGGTTCATGAAGAAGCGCGACGCCACCGGAAAGCCGCTGAGCGCCGCCGTACTGCGGCAGATTGCGCTGAACTTCGTCCTCGCCGGCAGGGACACCTCCTCGGTGGCGCTCTCATGGTTCTTCTGGCTCGTCATGAACCACCCCGCCGTGGAGCAGAAAATCATCGACGAACTCACCGCGGTTCTCGCCTCCACGCGCGGCGGAGACCGGCGGAAATGGACAGAGGAAGCGTTGGACTTCGACGAAGCCGAGAAGCTTGTCTACCTGAAAGCCGCGCTGACGGAGACGCTGCGTCTGTATCCATCGGTGCCGCAAGATTTCAAGCACGCGGTGGCGGACGACGTGCTTCCGGACGGCACGGCGGTGCCGGCGGGTTCCACGGTGACATATTCGATCTACGCGGTGGCGAGGATGAAGAGCGTGTGGGGCGAGGATTGCATGGAGTTTAAACCGGAGCGGTTTTTATCAGTTCAGGGAAACCGGTTCGAACCGCCGAAGGACGGTTATAAATTCCTCGCGTTTAACGGTGGACCGAGGACCTGTTTGGGGAAGGACTTGGCTTATCTTCAGATGAAGTCTGTGGCCGCTGCCGTGCTTCTTCGGTACCGGCTGTTGCCGGTTCCCGGTCACCGGGATCAGCAGAAGATGTCGCTCACGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTCAGCAGAAGATGTCGCTCACGCTCTTCATGAAGCACGGGCTGCGCGTGTTCTTGGAGCCACGTCAACTCGAACCGCAGGCTGCCACGTCAGCTTGA 1731 0.5078 MDTPVLLTLAATLLSAYFLWFLLLARTLSGPKAWPLLGSVPSMIVNRNQVHDFLAANLRNTLGTYQTCILPFPLVARKEGFFTVTSNPRNIEHVLKTRFDNYPKGPHWQAAFHDLLGHGIFNSDGDTWLMQRKTAALEFTTRTLRQAMARWVNRTIKNRLWCILDKAVKGKLSVDLQDLLLRLTFDNICGLTFGKDPQTLSPDLPENTFTVAFDSATEITLQRLLYPGILWKFQKLLSIGKERKMQQSLKIVETYMNEAISAREKSPSDDLLSRFMKKRDATGKPLSAAVLRQIALNFVLAGRDTSSVALSWFFWLVMNHPAVEQKIIDELTAVLASTRGGDRRKWTEEALDFDEAEKLVYLKAALTETLRLYPSVPQDFKHAVADDVLPDGTAVPAGSTVTYSIYAVARMKSVWGEDCMEFKPERFLSVQGNRFEPPKDGYKFLAFNGGPRTCLGKDLAYLQMKSVAAAVLLRYRLLPVPGHRDQQKMSLTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQQKMSLTLFMKHGLRVFLEPRQLEPQAATSA 576
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca01g00722 576 PANTHER CYTOCHROME P450 3 493 - -
Cca01g00722 576 PANTHER CYTOCHROME P450 FAMILY-DEPENDENT FATTY ACID HYDROXYLASE 3 493 - -
Cca01g00722 576 SUPERFAMILY Cytochrome P450 20 484 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca01g00722 576 Coils Coil 546 548 - -
Cca01g00722 576 PRINTS P450 superfamily signature 301 318 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca01g00722 576 PRINTS P450 superfamily signature 364 375 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca01g00722 576 PRINTS P450 superfamily signature 454 465 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca01g00722 576 PRINTS P450 superfamily signature 445 454 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca01g00722 576 Pfam Cytochrome P450 30 490 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca01g00722 576 Gene3D Cytochrome P450 25 501 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca01g00722 576 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 447 456 IPR017972 GO:0005506|GO:0016705
Cca01g00722 576 PRINTS E-class P450 group I signature 405 429 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca01g00722 576 PRINTS E-class P450 group I signature 454 477 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca01g00722 576 PRINTS E-class P450 group I signature 310 336 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca01g00722 576 PRINTS E-class P450 group I signature 290 307 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca01g00722 576 PRINTS E-class P450 group I signature 444 454 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca01g00722 576 PRINTS E-class P450 group I signature 363 381 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca01g00722 Cca-Chr1 9469355 9471294 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca01g00722 5 492 Cytochrome P450 AT5G58860 72.131 0.0 754
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca01g00722 K15401 - gmx:100787559 829.32