Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca01g00684 ATGACACCAACCTTCACTCTCCTCTTCTCCCTCTCCGCCATTCTCCTCATAAccgccgtcactgccctcggctccgcctccaccatcgccgtcacctacgccaccgccaccgTCTGCGGCATAGTCGCCGGCGAGCCCAACCACCACATCCAGTGCTCCCGTAACGGAAAACTTCTCCCTCTCACCCTCCCCAACGTGTCCTTCCAGTCCATCTCCGGCGGCCGGAGCTTCTTCTGCGGCCTCCGCTCCGGAGGCCGCAGCCTCCACTGCTGGGACACCGCCGTACCCGCGGCGGAGCTCCACCCCAAGAGGGTGTTCCACAGCGACGCGGTGCAGTTGGCTGACGTGGCAGTTGGTGACTCTCAGGTTTGCGCTGTAGAGGTGCAATCCGGTGCGGTGAGGTGTTGGAGAGGAAGCGGTGGGGTCGAGTTTAGTTCGCCTTCGGAGGGGTTAAGGTTTCGAAGTGTCACGTGTGGTTGTGGTTTTTCGTGTGGGATAgtgagagagagtggtagggttgtgtgttggggtgatgagggtgagggtgCAAGTGCAAGTGAGATTCAAACACAGTTTGAGAATTTAGCTATGTCGAGTTTGGTTGCTGGGGTGTCACACGTGTGTGGCTTGACCCTTCACGGTGGTTTGGTTTGTAAAGGGAACAATGGTTCTGGTCAACTTGGTGGTGGTGGTGTTTTGAGTTCCTTGGAGTTTTCTGGTCTTGCTTTGGGAGAAGATTTCACGTGTGGTATTAAGCGTAGGAATGGGGTCGTTGTGTGTTGGGGTGGTGGTTTTGATAGTGATGATGATGTAGTAAAAGGTGTTTCCTTTGAGTCACTTGTTGCTGGTTTGGATTATGTGTGTGGGTTGACAACTAGGAATTTGTCACTGCTTTGTTGGGGTGCTAAGGGTAAGTTTCATGAGGCTATTGAGATTCCATTGGGAGTGATTCTTCCAGGTCCATGTGTTGAAGGTGGTTGTGGTTCTTGTGGTACATATCCTGATTCTGATGTTCTATGTCATGGTTCTGGGAGTGTTTGTTACCCTTGTCCAATTGAGGTTCCACTAGCTGTGCCGTTGCTTCCACCATCAACTCAAGTTGTTCCAAAACAAGATGGAGGGAGAGGGTTGAGGGGAATGTGGGTTATTTTGGTTGTTGGATCAGTTGGGGCTTTTGCTGGTTTGTGCAGTGTGCTTTATTTGCTTTGGGTTGGTTCAAGGAGGTTTTTGTTGAGGAGAGAAGAGTTAGGTAATAATAATTCTGTGCGACCTACAAGCTCAGAGAGTGATGCCTATGTGGATATAGTTCCCATGCCTAATGTTGGTTCTAATGGGACAACATATAGGACTTTTTCTTCTAGCAAAAGGCAGGGTTCAAGAAGATTGAGGAGGCACAGGAGTGGTTCATCATCAAAGCATTTGGACAGGACTGAGAGTTTCAAGTTGGGTGAACTTGCAACAGCCACTGAAAGTTTCTCACTGAGTAATAAGATAGGTTCTGGTAGTTTTGGGAATGTTTACAAAGGCATGTTAGGAGATGGTCGTGAAGTGGCAATTAAAAGAGGAGACACCAGCACTATGAAGAAGAAGTTCCAGGAGAAAGACATTGCTTTTGATTCTGAAGTGGCATTGTTGTCCCGGCTTCACCACAAGCATTTGGTGAGGCTAATTGGGTTCTGTGAGGAGGATGATGAGAGGCTCTTGGTGTATGAGTACATGAGCAACGGATCACTTCATGACCATTTGCATGACAAGAACAATGTTGAGAGAAGTAGCAGCATTTTGAATTCTTGGAAGATGAGGATCAAGATTGCATTGGATGCTGCCAGGGGAATTGAGTACATCCACAACTATGCAGTGCCACCAATTATCCACAGGGACATCAAGTCCTCAAACATACTCTTGGACTCAAACTGGAATGCTAGAGTTTCTGACTTTGGATTGTCTCTAATTTGGCCTGAGACTGAGCAAGAATTGATCTCCACCAAAGCAGTTGGAACAGTTGGATACATAGACCCTGAGTACTATGTGTTGAATGTGCTGACCACAAAGAGTGATGTGTATGGCTTAGGAGTGGTGATGTTGGAGCTTCTCACAGGAAAAAGGGCTGTGTTCAAAACTGAAGATGGGTCAGGGCCTATTGGGATGGTGGAGTACACAAGCCCAAAGATAGCATCAGGGGAGCTTTGGAGTGTGTTGGATGATAGAGTTGGACAGCCAGAAGTGAATGAGGTTGAGTCCCTCGAGATTATGGCTTACACTGCTATGCATTGTGTGAACTTGGAGGGAAAGGAGAGGCCTGAAATGACTGACATAGTTGCTAACTTGGAGAGGGCATTGACCTTCATTGAGGGCAGTTCTACTAGCCTCTCCATTGCTTCATTCTCTGCCCCTCTCGAATGA 2403 0.4565 MTPTFTLLFSLSAILLITAVTALGSASTIAVTYATATVCGIVAGEPNHHIQCSRNGKLLPLTLPNVSFQSISGGRSFFCGLRSGGRSLHCWDTAVPAAELHPKRVFHSDAVQLADVAVGDSQVCAVEVQSGAVRCWRGSGGVEFSSPSEGLRFRSVTCGCGFSCGIVRESGRVVCWGDEGEGASASEIQTQFENLAMSSLVAGVSHVCGLTLHGGLVCKGNNGSGQLGGGGVLSSLEFSGLALGEDFTCGIKRRNGVVVCWGGGFDSDDDVVKGVSFESLVAGLDYVCGLTTRNLSLLCWGAKGKFHEAIEIPLGVILPGPCVEGGCGSCGTYPDSDVLCHGSGSVCYPCPIEVPLAVPLLPPSTQVVPKQDGGRGLRGMWVILVVGSVGAFAGLCSVLYLLWVGSRRFLLRREELGNNNSVRPTSSESDAYVDIVPMPNVGSNGTTYRTFSSSKRQGSRRLRRHRSGSSSKHLDRTESFKLGELATATESFSLSNKIGSGSFGNVYKGMLGDGREVAIKRGDTSTMKKKFQEKDIAFDSEVALLSRLHHKHLVRLIGFCEEDDERLLVYEYMSNGSLHDHLHDKNNVERSSSILNSWKMRIKIALDAARGIEYIHNYAVPPIIHRDIKSSNILLDSNWNARVSDFGLSLIWPETEQELISTKAVGTVGYIDPEYYVLNVLTTKSDVYGLGVVMLELLTGKRAVFKTEDGSGPIGMVEYTSPKIASGELWSVLDDRVGQPEVNEVESLEIMAYTAMHCVNLEGKERPEMTDIVANLERALTFIEGSSTSLSIASFSAPLE 800
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca01g00684 800 CDD STKc_IRAK 498 778 - -
Cca01g00684 800 PANTHER SERINE/THREONINE-KINASE CCR4-LIKE PROTEIN 5 793 - -
Cca01g00684 800 MobiDBLite consensus disorder prediction 443 474 - -
Cca01g00684 800 Gene3D Transferase(Phosphotransferase) domain 1 573 788 - -
Cca01g00684 800 PANTHER SERINE/THREONINE-PROTEIN KINASE-LIKE PROTEIN CCR4 5 793 IPR044815 GO:0004674
Cca01g00684 800 Gene3D - 62 313 IPR009091 -
Cca01g00684 800 SUPERFAMILY Protein kinase-like (PK-like) 471 776 IPR011009 -
Cca01g00684 800 Pfam Protein kinase domain 494 709 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca01g00684 800 SUPERFAMILY RCC1/BLIP-II 53 264 IPR009091 -
Cca01g00684 800 MobiDBLite consensus disorder prediction 456 470 - -
Cca01g00684 800 Gene3D Phosphorylase Kinase; domain 1 452 572 - -
Cca01g00684 800 ProSiteProfiles Protein kinase domain profile. 492 783 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca01g00684 800 ProSitePatterns Protein kinases ATP-binding region signature. 498 520 IPR017441 GO:0005524
Cca01g00684 800 SMART serkin_6 492 783 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca01g00684 800 ProSitePatterns Serine/Threonine protein kinases active-site signature. 623 635 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca01g00684 Cca-Chr1 9025477 9027879 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca01g00684 2 791 Receptor kinase-like Gene Family AT3G55950 50.973 0.0 731
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CR4L Cca01g00684 Pkinase 4e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca01g00684 - - gmx:100776682 1290.79
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca01g00684 01 9025477 9027879 Cca01g00684 01 9025477 9027879 ECH