Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca01g00681 ATGAAGAAGCTCtcaacttcttctcatgcatccccatcatcttcatcttcatcCATCACAAGCTTGGAACCAACTATGTGCACCTCCAAAAGCACCTCTTCAGGGTGTCTCACTTCCATCTTGCGCAAGATTCTTTGCTCTGATGGCCTTCCAAGAGACCAAACTAGAGAACTTGATTCACTTGACAAAGATCAAAACTTGAAGGGTAAGCAAAATGTTGAGactagtactacttctactactattactactcctGGGATAGTGGCAAGGTTAATGGGTTTGGAATCAATTGAGATGCCTTGTGGATCAAAACCAAATTCACTTTCTCGAAGCAGATCCATGAATTCTGTGGACTGTTTGGGAGAATTCAATGGAATGGAGGTTTTGCATAAGAGGGTTAAGTCCACCTTGTCTTTTAGGGAGCCTCCGACTTTTCTTTTGCATGAAAGTGACAAGTTTTTGGTGCTTAGTTTTGAAGGTAAGGGTGAGAGTAGGGAATTCAAGTCCAGTGGGAGAAAGAGAGAACAGGGTTGTGAAGAATTGAAGCAGAAAGTGAGATCAGAAAGAGGTGAGTTGAGGGAAAACAAAAGAGAAAAGGTGTGTGATGAGAAGGTACGGAAACTTGGGGGAAAAAGGGTGTCTCATGTGTCTTGTGGGAATGTTGGAAGTGATGGTAAACTCAAAGAAATCACCAACACTATGCGTACTTCCAAGGCTTCATTTGAAAAGAAGAAGGGTTTTGATTATGAAGCAGTGAAATTGTCACAGAACATGAAGGGCAAGGAAGTGGCGGTAGGTGAAAAACagaagaggaggagaaggaagaagaagaaAACAATTTGTCAAACAGAAAACAAAGTAGAAGTTGATTGTAAGTCAGAAGATTCAAGCCCTGTTTCTGTCCTTGATTTTGAGCGTGAACTTTGTGGAACAGTTGATTTGAGTTCAAGGAGAAAGTTGTCACCAAAGCTTGAAAGTGATCAGCACATTCCTGTGAATTCTGATGATAACTTAGTGATTGATGAGAAGAAGGATAAGGCAATTGacaacaacaacaacaaaaaTGAAGGGTCAAAGAAAAAAGAGAAGAAGGTCCAAGATTATATAGATATTTGTAGTGAAGTTTGCCGAATAGTTGATGATGAATTGGCTGCATCAAATCAGAAACATATATGGACGAATAAACAAGGTGATTTAGGTGGTATAAGTGCAGATTTAGAGTCAGAAATTTTTGATTACTTGTTAAATGAGCTTGTGGATGAACTTGCTGGCATCCATTGA 1281 0.3622 MKKLSTSSHASPSSSSSSITSLEPTMCTSKSTSSGCLTSILRKILCSDGLPRDQTRELDSLDKDQNLKGKQNVETSTTSTTITTPGIVARLMGLESIEMPCGSKPNSLSRSRSMNSVDCLGEFNGMEVLHKRVKSTLSFREPPTFLLHESDKFLVLSFEGKGESREFKSSGRKREQGCEELKQKVRSERGELRENKREKVCDEKVRKLGGKRVSHVSCGNVGSDGKLKEITNTMRTSKASFEKKKGFDYEAVKLSQNMKGKEVAVGEKQKRRRRKKKKTICQTENKVEVDCKSEDSSPVSVLDFERELCGTVDLSSRRKLSPKLESDQHIPVNSDDNLVIDEKKDKAIDNNNNKNEGSKKKEKKVQDYIDICSEVCRIVDDELAASNQKHIWTNKQGDLGGISADLESEIFDYLLNELVDELAGIH 426
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca01g00681 426 Pfam DUF761-associated sequence motif 77 97 IPR032795 -
Cca01g00681 426 MobiDBLite consensus disorder prediction 58 81 - -
Cca01g00681 426 MobiDBLite consensus disorder prediction 1 33 - -
Cca01g00681 426 PANTHER - 1 424 - -
Cca01g00681 426 PANTHER OS05G0128300 PROTEIN 1 424 - -
Cca01g00681 426 Coils Coil 178 198 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca01g00681 Cca-Chr1 8943303 8945238 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca01g00681 29 423 TRM (TON1 Recruiting Motif) Superfamily AT5G58630 29.710 1.32e-17 82.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca01g00681 - - gmx:102660067 581.252