Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca01g00662 ATGAACCCATCTGAGCATTCTATGGAACAGGGAATATCTCAGCAGAATTTCAAGAGGACATCTTGCGCAACTGTGCTTACTCTAGCTTACCAAAGTCTTGGAGCAGTATACGGTGACCTCAGTACTTCCCCTCTTTATGTTTACAAGACCACATTCTCAGGGAAATTGAGCCTCAAAGAAGACGATGAAGAAATTTTTGGGGTGCTTTCATTTATCTTCTGGACATTTACCATTGTCACTCTCTTCAAATACGTGTTCATCGTGATGTCTGCTGATGACAATGGGGAAGGGGGTACCTTTGCATTATACTCACTTCTCTGTCGAAATGCCAGACTAAGTACTTTACCAAATCAACAACCAACAGATGAGAAATTGTCTACTTATGCCACAGAAGATTCTGCAGACACATGGCAGTCTTCTCTGTTGAGGTTATTCCTTGAAAAGCACCCGGGGATTCGGAAAGGACTTCTGGTCTTTGTCCTGCTAGGAACCTGTATGGCAATTGGGGATGGTGTGATTACTCCTGCAATATCAGTTCTTGCTGCAGTTTCTGGCGTTAAAGTCAAAATCAGTGAACTCCATGACAATTATGTTATAATGGTCTCGTGTGTCATTTTGGTCGGGCTATTCTCCATTCAGCATCATGGCACACATAGAGTTGCTTTCTTGTTTGCTCCAGTTGTTGCAACATGGCTTTTGTGTATCAGTGGTATTGGTGTATACAACATATTCTACTGGAACCCGAAAATATATCGTGCACTTTCTCCAGTCTACATGGTGAAGTTCATCAAAACAACTGGCATTGAAGGATGGTTGTCATTAGGAGGAGTGGTGCTTTCCATTACAGGTGTGGAGACCATGTTTGCTAACTTGGGTCATTTTTCTGCTCTCCCAATAAAGATAGCTTTCACATGTATAGTATATCCCTGCCTCATTCTGGCATATATGGGTGAGGCTGCATTCCTCACTAGACATCATGAAGACATTCAGAGAAGTTTCTACAAAGCCATACCAGGCAAGAATTTAAaacctgtgttttggccagtgttcatagtggccacttttgcagccattttaagaagtcaagcagtaatttctgctaccttttccattataagccagtgccatgcattaaattgttttccttcagtgaagattattcacacttcaaccagaatatatgggcagatatacatcccagaagtcaattggatattaatgtgcttttgtttggctatcaccattggcctaagggacactaacatgataggtcatgcatatgGGCTGGCAATCACCACTATTATGTTTGTGACAACATTCTTGATGACACTAGTAATTGTGATTGTCTGGAAGCAAGGAATAATAAAAGCCATTACATTTCTGCTATTGTTTGGATCAATTGAACTTCTTTACATCTCAGCTTGTATCTGCAAGGTTCCTGAAGGAGGGTGGATTTCACTTGTGCTATGTTTTATCTTTATGTGTATAATGTACACATGGAACTATGGGACAATGAAGAAACAGCAATTTGATGTGGAAAACAAGGTTTCAATGAATAGGATGCTATCTATGGGACCTTCCCTCGGCATGGTTCGTGTCCCAGGCGTGGGACTCATGTACTCTAATCTGGCTTCTGGTTTCCCTGCTATGTTTGGTCACTTTGTTACAAACTTGCCAGCATTCCATCAGGTGCTAGTTTTTGTTTGTGTCAAATCTGTTCAAGTCCCTCGTGTCAGTGAAACCGAACGGTTGGTCATCAGTAGGGTCAGTTCTAAGGAGCTTGGCATGTTTCATTGCATTGTGAGGTATGGTTACATGGACATCCAACAGGAGAAATATAATTTTGAGAACAAGTTGATATCTGCTATAATACAATTTGTGGAATCTGAGGAGAGCATAGCAGAACCAACACGTGAGTTGTCAGCAAATGATGGCAACTCAAATGTGGAAGAACTTGGTGTTTCTCTTTCACAAAACACATTTGATGAGTCATGTTGTGAAGAGAACTTGTTCCCATCTTCATGTGTTTTGCAGGTAATGGTGAATGGTGATGACCATATTGAAAAGTCTTTCTACAAAGATGAGTCTATGCAGATTATGAAAGCAAAAGAGTTTGGTGTTACCTATATACTAGGTCATTCACTTGCAAGGGCAAATAACTCATCTTCCTTCCTAAAGAAATTTGCTATAGATATTGTTTTTGCATTTCTAAGCAAGAATTGCAGAGAGTCTGATGCTGTTCTGGATGTTCCCCATACTTCTTTGCTAGAGGTTGGCATGACTTACTATGTCTAA 2295 0.3625 MNPSEHSMEQGISQQNFKRTSCATVLTLAYQSLGAVYGDLSTSPLYVYKTTFSGKLSLKEDDEEIFGVLSFIFWTFTIVTLFKYVFIVMSADDNGEGGTFALYSLLCRNARLSTLPNQQPTDEKLSTYATEDSADTWQSSLLRLFLEKHPGIRKGLLVFVLLGTCMAIGDGVITPAISVLAAVSGVKVKISELHDNYVIMVSCVILVGLFSIQHHGTHRVAFLFAPVVATWLLCISGIGVYNIFYWNPKIYRALSPVYMVKFIKTTGIEGWLSLGGVVLSITGVETMFANLGHFSALPIKIAFTCIVYPCLILAYMGEAAFLTRHHEDIQRSFYKAIPGKNLKPVFWPVFIVATFAAILRSQAVISATFSIISQCHALNCFPSVKIIHTSTRIYGQIYIPEVNWILMCFCLAITIGLRDTNMIGHAYGLAITTIMFVTTFLMTLVIVIVWKQGIIKAITFLLLFGSIELLYISACICKVPEGGWISLVLCFIFMCIMYTWNYGTMKKQQFDVENKVSMNRMLSMGPSLGMVRVPGVGLMYSNLASGFPAMFGHFVTNLPAFHQVLVFVCVKSVQVPRVSETERLVISRVSSKELGMFHCIVRYGYMDIQQEKYNFENKLISAIIQFVESEESIAEPTRELSANDGNSNVEELGVSLSQNTFDESCCEENLFPSSCVLQVMVNGDDHIEKSFYKDESMQIMKAKEFGVTYILGHSLARANNSSSFLKKFAIDIVFAFLSKNCRESDAVLDVPHTSLLEVGMTYYV 764
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca01g00662 764 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 3 632 IPR003855 GO:0015079|GO:0016020|GO:0071805
Cca01g00662 764 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 691 764 IPR003855 GO:0015079|GO:0016020|GO:0071805
Cca01g00662 764 PANTHER POTASSIUM TRANSPORTER 3 632 - -
Cca01g00662 764 PANTHER POTASSIUM TRANSPORTER 691 764 - -
Cca01g00662 764 Pfam K+ potassium transporter 30 607 IPR003855 GO:0015079|GO:0016020|GO:0071805
Cca01g00662 764 TIGRFAM kup: potassium uptake protein 28 764 IPR003855 GO:0015079|GO:0016020|GO:0071805
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca01g00662 Cca-Chr1 8651232 8656889 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca01g00662 122 764 Inorganic Solute Cotransporters AT2G30070 64.230 0.0 846
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca01g00662 K03549 - gmx:100800428 1400.57
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca01g00662 01 8651232 8656889 Cca01g00662 01 8651232 8656889 ECH