Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca01g00657 ATGGAGAGGGTGAAGGTTGCGCGTGCCCCAAAATTATTGCCATATCACGAGAGCCTTGAGTGTTTACAGGCATATGAGGTCTGTTGGAACGTCGACTGCTACCACTCTGACATCCTCACTGCATTCGACGCCACCATGACCGATGACATGGACGTGATCTCCCTTAGCGTGGGGGGCATGGTGGTGCCCAACCACCTGGATGTCATCGCCGTGGGGGCCTTTGGAGCTAGTGAGGTTGGCGTCTTCATCTCCTCCTCCACTAGGAACGGCAGCCTTGATAGTTTGACAATGACAAATGTGGCACCTTAG 309 0.5405 MERVKVARAPKLLPYHESLECLQAYEVCWNVDCYHSDILTAFDATMTDDMDVISLSVGGMVVPNHLDVIAVGAFGASEVGVFISSSTRNGSLDSLTMTNVAP 102
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca01g00657 102 PANTHER SUBTILISIN-LIKE PROTEASE SBT1.5 22 102 - -
Cca01g00657 102 Gene3D Peptidase S8/S53 domain 22 102 IPR036852 GO:0004252|GO:0006508
Cca01g00657 102 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN-RELATED 22 102 - -
Cca01g00657 102 SUPERFAMILY Subtilisin-like 23 99 IPR036852 GO:0004252|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca01g00657 Cca-Chr1 8595739 8596654 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca01g00657 22 102 Subtilisin-like Serine Gene Family AT3G14240 62.963 2.59e-29 107
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca01g00657 - - gmx:100813247 114.39