Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca01g00656 ATGGCACAGTGCGTGACCAACATGGCGCAGGCCGCCGCGTGCCGCAATGGTACGGCTGCGGCACACCTGAAAGTGATTTCCCTCTTCACGATCTTTGTGACCAGCATGACGGGTGTGTCTGCACCCGTCATGCTGGCACGATACTTTCAAGGGAAATCTCTTTATGACATGGCTATCTTGGTGATCAAGTGCTTCGCCGCCGGTGTTATTCTCTCCACCTCATTGGTCCACGTGTTGCCAGATGCCTTTGAGGCGCTTTCTGACTGCCAGGTGGCATCCCGGCATCCTTGGAAGGACTTTCCCTTCGCCGGACTGGTGACACTCGGTGGGGTTCTGATGGCGCTGCTTGTGGACACTGTTGCAAGCTCCCACGTGGAGCATGCGCACTACACGCCAgtggagacggaggagaaggagggaggtggaggtggcggtggcgcgtggagcatggaggtggttggtggtggtgaagaagagaggGTCGAAAAGTTGATGAAATTCAAGCAGAAGTTGGTGTCGCAGGTTTTGGAGATTGGAATCATCTTTCACTCTGTTATCATAGGAGTCACTATGGGGATGTCTCAGAACGTTTGCACCATTCGCCCACTTGTTGCTGCTTTGTCCTTTCATCAGATTTTTGAAGGCTTGGGACTTGGTGGCTGCATTGCTCAGGCTGGATTTAGCTTTGGAACGACGGCTTACATGTGTTTCATGTTCTCAGTGACAACACCAATGGGGATAATTTTGGGGATGATATTATTCTCAATGACTGGTTATGATGATAGTAACCCTAATGCCTTGATCATGGAAGGGTTACTAGGTTCAGTTTCTTCAGGAATACTAATTTACATGGCTCTTGTTGACCTCATAGCAGTTGATTTCTTTCATAACAAGCTTATGAACTCCAATTTGTGGTTGAAAAAGGTGTCCTTTATTGCATTGACTCTTGGCTCTGCCTCAATGTCTGTTCTTGCACTTTGGGCTTGA 987 0.4428 MAQCVTNMAQAAACRNGTAAAHLKVISLFTIFVTSMTGVSAPVMLARYFQGKSLYDMAILVIKCFAAGVILSTSLVHVLPDAFEALSDCQVASRHPWKDFPFAGLVTLGGVLMALLVDTVASSHVEHAHYTPVETEEKEGGGGGGGAWSMEVVGGGEEERVEKLMKFKQKLVSQVLEIGIIFHSVIIGVTMGMSQNVCTIRPLVAALSFHQIFEGLGLGGCIAQAGFSFGTTAYMCFMFSVTTPMGIILGMILFSMTGYDDSNPNALIMEGLLGSVSSGILIYMALVDLIAVDFFHNKLMNSNLWLKKVSFIALTLGSASMSVLALWA 328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca01g00656 328 TIGRFAM zip: ZIP zinc/iron transport family 9 328 IPR004698 GO:0005385|GO:0016021|GO:0071577
Cca01g00656 328 PANTHER ZINC TRANSPORTER 6, CHLOROPLASTIC 3 328 - -
Cca01g00656 328 Pfam ZIP Zinc transporter 22 325 IPR003689 GO:0016020|GO:0030001|GO:0046873|GO:0055085
Cca01g00656 328 PANTHER ZINC/IRON TRANSPORTER 3 328 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca01g00656 Cca-Chr1 8590018 8592928 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca01g00656 1 328 Inorganic Solute Cotransporters AT2G30080 66.762 5.60e-160 449
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca01g00656 K14709 - gmx:100802186 561.222
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca01g00656 01 8590018 8592928 Cca01g00656 01 8590018 8592928 ECH
Cca05g01284 05 30649498 30650418 Cca01g00656 01 8590018 8592928 ECH
Cca01g00656 01 8590018 8592928 Cca05g01284 05 30649498 30650418 PCT