Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca01g00653 ATGGAATTCAACAAGTTCAGAATCAGAAGCTATGAGGGGCAATCTGATAGGGCTCAAGTGGAAGATCTTGAGAGAAGATGCGAAGTAGGGCCATCAGAAAGTGTGTTTCTCTTCACAGACACTATGGGTGACCCCATTTGTAGGATCCGGAACAGTCCCATGTACATGATGCTGGTGGCAGAGTTGGACAATGAATTGGTTGGTGTCATTCAAGGGTCTATAAAAGTGGTCACGGTTCATGGCCATCCTCCAAAGGATTTGGCAAAGGTGGGGTATGTCCTTGGCCTAAGGGTATCACCCCATCATAGGAGAAAAGGGATTGGCTCAAGCCTAGTGAAAAGGCTAGAAGAATGGTTCACTTCCAAGGATGTGGACTATGCATACATGGCAACAGAGAAAGACAACCATGCCTCAGTGAGTCTCTTCATGGACAAGTTTGGCTACACCAAGTTTAGGACTCCAGCTATTCTTGTGAACCCTGTGAACCATCATTGCTTTCAGATATCACCCAACATTGAGATTGCAAGGCTGAAGGTTGACCAAGCTGAGTACCTCTATAGAAGATTCATGGGGTCAACAGAGTTTTTCCCTAATGACATAGGGAACATACTTAGGAACAAGCTCAGTTTGGGGACATGGGTGGCTTATTTCAAAGGAGATATTGCTTGGGGTGATTTTGGGTCGGATGGGCAAGTGCCAAAAAGTTGGGCTATGCTTAGTGTATGGAATAGTGGTGAAATATTCAAGCTAAGGCTAGGGAAAGCACCTTTTTCTTGCTTGTTATGCACCAAGAGTTGGTGGCTCATTGATAAGATGTTCCCATGCTTGAAATTGCCTACCATACCTGATTTCTTCAACCCATTTGGGTTCTATTTCATGTATGGGGTGCACCATGAAGGGCCATTCTCAGGGAAGCTAGTTAGGGCCTTGTGCCAATTTGTACACAACATGGCTAATGAGTCCAAGGATGAGAATTGCAAGGTCATTGTGACTGAAGTTGGAGGAAGAGATGAGCTCAACCATCATATTCCACACTGGAAATTGCTCTCATGCCCTGAGGACTTGTGGTGCATAAAGGCCTTGAAAAATGAAGGGACAAACAAGTTCCATGAATTGACCAAAACCCCACCAACAAGAGCACTTTTTGTAGACCCAAGAGAGGTTTAG 1167 0.449 MEFNKFRIRSYEGQSDRAQVEDLERRCEVGPSESVFLFTDTMGDPICRIRNSPMYMMLVAELDNELVGVIQGSIKVVTVHGHPPKDLAKVGYVLGLRVSPHHRRKGIGSSLVKRLEEWFTSKDVDYAYMATEKDNHASVSLFMDKFGYTKFRTPAILVNPVNHHCFQISPNIEIARLKVDQAEYLYRRFMGSTEFFPNDIGNILRNKLSLGTWVAYFKGDIAWGDFGSDGQVPKSWAMLSVWNSGEIFKLRLGKAPFSCLLCTKSWWLIDKMFPCLKLPTIPDFFNPFGFYFMYGVHHEGPFSGKLVRALCQFVHNMANESKDENCKVIVTEVGGRDELNHHIPHWKLLSCPEDLWCIKALKNEGTNKFHELTKTPPTRALFVDPREV 388
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca01g00653 388 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 6 162 IPR000182 GO:0016407
Cca01g00653 388 PANTHER ACYL-COA N-ACYLTRANSFERASES (NAT) SUPERFAMILY PROTEIN 1 388 - -
Cca01g00653 388 PANTHER ACYL-COA N-ACYLTRANSFERASES (NAT) SUPERFAMILY PROTEIN 1 388 - -
Cca01g00653 388 Pfam Acetyltransferase (GNAT) family 47 148 IPR000182 GO:0016407
Cca01g00653 388 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 14 152 IPR016181 -
Cca01g00653 388 Gene3D - 10 155 - -
Cca01g00653 388 CDD NAT_SF 57 128 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca01g00653 Cca-Chr1 8558301 8560814 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Cca01g00653 Acetyltransf_1 6.7e-17 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca01g00653 - - gmx:100799507 783.482
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca01g00653 01 8558301 8560814 Cca01g00653 01 8558301 8560814 ECH