Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca01g00646 ATGGGTGGCAACACAAAGGAAAAGATGGCTCCAACTAAACCCCCTTTGAGGCTAATTTCGTCATTTCAAGCTCCTAATGAAAATATTAAGGTAGAGAAGTCTCCAACTAAAAATGCAGTAAATTCTGGTGCTTCCATTGTGGATTCTACTTCAAACCTAGCTGAACAATTTCACGAAGCAAAACATGATTTGGGACCTAATTATGAACAAAACATGATGGAAGTAAAGAGGAAGAAGAGAATCATGTCAAACCGACTTTCAGCCCAAAGATCTAGGTTGAAGAAGTTAAGATCCTTGGCCAGTGTGGAAATTCAAGCCAAAAATTTTGAGGACCAAATAGCCGAACTTCAACAACAAGAAGCTTCCTGCAGAAATCAAAAGCAACTTATGATGGTGGAAGAACAGAAATTGAACCAGGAAATAGAAGTTCTTCGGAATGAGACATTGCTCATAAATGCTGAAATTGAGAAGAACAAAGGCGAAGCAAATAGGCTGATGGAACTCCTAGTGATGAAACAACAACAATTGCAAACGAGGTTGCTTAGTGAGAATATTGATCTGACGGAGCCACTGTACAATGATCCAACATCAAATTATTTTACAAACTCATATCAAGTTGCAGAAAAAGAAGTGGATACTTCATACACCACCCAAACTTCAAGTGAACTTGACTCTCCCAAACTACATGGGATCGATGGAGATGAATTTTATAAGAGGAATATTTAA 726 0.3802 MGGNTKEKMAPTKPPLRLISSFQAPNENIKVEKSPTKNAVNSGASIVDSTSNLAEQFHEAKHDLGPNYEQNMMEVKRKKRIMSNRLSAQRSRLKKLRSLASVEIQAKNFEDQIAELQQQEASCRNQKQLMMVEEQKLNQEIEVLRNETLLINAEIEKNKGEANRLMELLVMKQQQLQTRLLSENIDLTEPLYNDPTSNYFTNSYQVAEKEVDTSYTTQTSSELDSPKLHGIDGDEFYKRNI 241
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca01g00646 241 Coils Coil 99 147 - -
Cca01g00646 241 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 79 94 IPR004827 GO:0003700|GO:0006355
Cca01g00646 241 PANTHER BASIC LEUCINE ZIPPER 34 48 195 - -
Cca01g00646 241 SMART brlzneu 72 136 IPR004827 GO:0003700|GO:0006355
Cca01g00646 241 SUPERFAMILY Leucine zipper domain 75 130 IPR046347 GO:0003700|GO:0006355
Cca01g00646 241 Pfam Basic region leucine zipper 76 123 IPR004827 GO:0003700|GO:0006355
Cca01g00646 241 PANTHER ACTIVATOR OF SPOMIN LUC3 48 195 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca01g00646 Cca-Chr1 8452815 8455881 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca01g00646 72 150 bZIP Transcription Factor Family AT2G42380 32.911 1.28e-07 49.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Cca01g00646 bZIP_2 2.3e-05 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca01g00646 - - ccaj:109814794 147.902