Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca01g00644 ATGGAGAACTATGAAATGGAGGGCCACAAGCCAATTTCATCATTTCAATTGTTACAAAAGACTATCCTTGGTGACACTAGCAGCTCCCAACCTCCTATCAATAACCCTCCAACAATGAATGAAGTTTCTTGTGTTTCCTCTGTCGATTCTAGATCAAAACTAGTTGAACAATTCCCTGAAGGAAAACCTAGTGATATGGCACTTAATTATGACCAATACATGAAGGATCTTAAAAAGCAAAGGAGAATCACATCAAAACGAGTTTCTTCTCTAAGATCTAGGCTCAAGAAGAAAATCTTTTTGGCCAATTTAGAAGTTCAAGCCACAACTTTGGAGAACCAATTGGCCAGACTTAAATCACTAGAGGCTTTCCACCAAAATCAGAAGCAAATGATGATGGTGGAAGAACATGCATTGTGTCAGGAAATTGAATTTCTTGAGAAAGAGAAATTACTCAGAGATGTTGAAGATGAGAAGAACATTCGTGAAGCGAATAGGCTGAAGGAACTCCAGATAAAGAAAAATGAGCAAGTGGAATCATGGTTGCTGAATAGAAAACATGTTGTGTCTGATGATCAAATGTCAAATTGTTATGCAAACTCATATCAAGGAAATGGAGTGGAGACTCCGTACATACCACCACAATCAAGTCAAATGTGGATATATGGTATTCCAAACATGGATGAAACATTTGTGACTCTGCCCAACTTTATGGGATCGATGGATCAGAGGAATCATATAAGCAATGAATATGCTTCGAATCCTAACCTTAATTAG 777 0.3771 MENYEMEGHKPISSFQLLQKTILGDTSSSQPPINNPPTMNEVSCVSSVDSRSKLVEQFPEGKPSDMALNYDQYMKDLKKQRRITSKRVSSLRSRLKKKIFLANLEVQATTLENQLARLKSLEAFHQNQKQMMMVEEHALCQEIEFLEKEKLLRDVEDEKNIREANRLKELQIKKNEQVESWLLNRKHVVSDDQMSNCYANSYQGNGVETPYIPPQSSQMWIYGIPNMDETFVTLPNFMGSMDQRNHISNEYASNPNLN 258
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca01g00644 258 PANTHER BASIC LEUCINE ZIPPER 34 40 255 - -
Cca01g00644 258 Coils Coil 101 128 - -
Cca01g00644 258 SUPERFAMILY Leucine zipper domain 77 132 IPR046347 GO:0003700|GO:0006355
Cca01g00644 258 PANTHER - 40 255 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca01g00644 Cca-Chr1 8400628 8402966 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca01g00644 74 154 bZIP Transcription Factor Family AT3G58120 30.864 7.89e-08 50.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca01g00644 - K14788 ccaj:109814794 502.671