Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca01g00614 ATGTCTCTTAACCACCACCTCATGCGACTCCATCCATGGAGGCCCCTTGGTCAATCGTCTTTTGTTTCTCAAATTCTTGGTGGTATGACTTTAGGTCCTTCTATTCTTGGGCACAACACTACATTCATTGAAAAGGTTTTTCCCCCCAAAGAAAGACATGTGCTTGATACCATAGCCTTTTTTGGTATTATGTTATCTACCTTCCTAACTGGGGTAAAGATAGATCCAACAATTGCTTTTACATCAGGTAAAAGGACATTTGCCATAGGACTTTTAGCCTACTTTGTTCCTTATACTTTTGCCACAACAGTTGTCTATATCCTCAATCGATTTGCATCATTGGACAATGATGTTTTTACGGTGCTCCCAATTGTGGTGGAACTTCAATGTATTGCAACCTTTCCAGTAATTACTCGTTTTCTTGCTGAACTTCACATCTTAAATTCAGAGATTGGACGGTTGGCAACTTCTTCTTCGTTAGTGTGTGATGCCTGCTTCATCTTAATTATGACAATAAAGTTTGTTGCAAATTTATCCTTCACAAAGTCAATAGGAGTATCAATTGGATCTTTATTATCCACCGTTCTACTTCTTTTGTTCATTATCTTTGTAGTTCACCCAACTGCAATATGGGCAATTCAACAATCACCAGAAGGAAAACCAGTTCAAGAAGCTTATATTTATGGGATTCTCATAATACTAGTATTTTCGGCATTCATAGGTGAAGTCATCGGTGTAAATGGAATCATTGTATCATTCTTGGTGGGTTTAGCTATACCAGAAGGTCCACCATTAGGAGCAGCATTGGTAGATAAGCTCGAATGTTTTGTTTCAATGGTGCTCATACCTATCCTTTTTGTTATAGTTGGATTAAGGACAGATGTGTTTGTCATACAAACGATAAAGACCTTAGCTGCAATTCAGTTAATCATTTTCATTGCTTTCTTTGGAAAAATTTTAGGGGTTTTGTTGCCTCTCCTTTTCCTTAGGATCCCATTTCGAGATGCATTTTCTCTTGGTCTTATAATGAACTGCAAAGGCACTCTTGAACTAGCCATGTTGATTGCCTTGAAATTTAAAAATGTCTTGGATGATGAATGCTTTACAATTTTGGTTCTTACTTTAGTGCTTGTAACTGGTATTATATCACCTCTTGTAAAAGTTCTATATGATCCTTCTAAGAGGTTTATTGCTTATAAAAGGAGGACAATTATGCATCACAAAAATGGTGAACAATTCCGCTTACTAGCTTGCATTCACAATCAGGATAATGTTTTGGCAATTTTGAACCTCCTTGCATCTTCAAATCCAACTGAAGCATGCCCTTTTGATTTAGTTGTGCTTCATCTTATTAAGCTTGTGGGGCGAGCTTCTTCTCTTCTTGTTGCACATATGCCGCGTAAAAAGCTTAGTGAACATCCAACTCAATCTGAAAAGATTTTCAACTCATTCAACAAGTTTGAAGATGCATATAAGGGTAAGGTCACATTGCATTGCTATAAGGGCATTTCTCCTTATGCTACTATGCACAATGATGTGTGCTACTTAGCACTTGAAAAGAGAACAACTTTTATTATCATACCTTTTCATAAGCAGTGGGTAATTGGAGGAAGAAGTGAGTCATCTTTTGCTTTTAAGCAACTTAATAAGAACGTTCTAGAGAAAGCTCCTTGCTCAGTTGGGGTCCTAATTAATCGTGGCAATCAAAAGACATTTTGGTGTGGTCATACAAAGGAATCAATATATCATGTGGCTGTGCTTTTCTTTGGCGGTGCAGATGATCGGGAAACACTTTCATATGCAAGACGCATGTTAGATCAACCTTATGTACATATTACTCTTTTTCATTTTTCATCTTCAACGGATATTATTGGTGGATCAGAAAGGAGCAAAATGCTTGATACCCAAATCTTGAGTGAGTTTAGGCTAAAGGCCTTTCGGAATGAAAGAGTTTATTTCAAAGATGAGATAATAGTGAATGAAAGGGATGTGCTTTCAGTAATTGAATACATGGAAAATTGCTATGATCTTGTCATGGTTGGGAGAAGGCATGCAGACTCAAAATTAATGACTGAACTTAGAAAATGGAAGAACGGAGAGTTGGGGGTTGTCGGAGAAATCCTTGCCTCTTTAAATATTGGAGCCCATACATCAATTTTAGTGGTGCAACAACAAACTAGATTTTGGGGATCACGTGATCCAGAGGAGTCCACACATTTAAGAAAAGTAGATATATAA 2238 0.3727 MSLNHHLMRLHPWRPLGQSSFVSQILGGMTLGPSILGHNTTFIEKVFPPKERHVLDTIAFFGIMLSTFLTGVKIDPTIAFTSGKRTFAIGLLAYFVPYTFATTVVYILNRFASLDNDVFTVLPIVVELQCIATFPVITRFLAELHILNSEIGRLATSSSLVCDACFILIMTIKFVANLSFTKSIGVSIGSLLSTVLLLLFIIFVVHPTAIWAIQQSPEGKPVQEAYIYGILIILVFSAFIGEVIGVNGIIVSFLVGLAIPEGPPLGAALVDKLECFVSMVLIPILFVIVGLRTDVFVIQTIKTLAAIQLIIFIAFFGKILGVLLPLLFLRIPFRDAFSLGLIMNCKGTLELAMLIALKFKNVLDDECFTILVLTLVLVTGIISPLVKVLYDPSKRFIAYKRRTIMHHKNGEQFRLLACIHNQDNVLAILNLLASSNPTEACPFDLVVLHLIKLVGRASSLLVAHMPRKKLSEHPTQSEKIFNSFNKFEDAYKGKVTLHCYKGISPYATMHNDVCYLALEKRTTFIIIPFHKQWVIGGRSESSFAFKQLNKNVLEKAPCSVGVLINRGNQKTFWCGHTKESIYHVAVLFFGGADDRETLSYARRMLDQPYVHITLFHFSSSTDIIGGSERSKMLDTQILSEFRLKAFRNERVYFKDEIIVNERDVLSVIEYMENCYDLVMVGRRHADSKLMTELRKWKNGELGVVGEILASLNIGAHTSILVVQQQTRFWGSRDPEESTHLRKVDI 745
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca01g00614 745 Pfam Sodium/hydrogen exchanger family 8 386 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
Cca01g00614 745 Gene3D - 10 397 IPR038770 -
Cca01g00614 745 PANTHER OS08G0117800 PROTEIN 13 730 - -
Cca01g00614 745 PANTHER CATION/H + ANTIPORTER 13 730 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca01g00614 Cca-Chr1 7847537 7851187 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca01g00614 14 745 Antiporter Super Family AT2G13620 37.057 9.16e-163 489
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca01g00614 - - gmx:102665255 1124
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca01g00614 01 7847537 7851187 Cca01g00614 01 7847537 7851187 ECH