Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca01g00605 ATGGAGACTGAAGCTGACTCAAGAGATAGTTCTCTCATTCTGCTCAAGCAAGGAGCTGAAGCTAGGGTTTTTGAGTCTTCTTTTGTGGGAAGGAAATCTGTTGTCAAGGAACGTTTCTCGAAGAAGTACAGGCATCCAATTTTGGATTCAAAATTGACCCTCAAGCGCTTAAACGCGGAAGCAAGGTGCATGACCAAAGCAAGGAGACTTGGTGTTCGCACTCCTGTGCTCTATGCTGTGGATCCTGTGTTGCACACTTTAACATTTGAATATGTTGAGGGGCCTTCAGTCAAAGATGTACTTCTCGAATTTGGGTCACGTGGTGGCGATAGAGAGTGGCTGGACAATATTGCATCCCAAATTGGTGATGCAATTGGAAAATTACATGATGGTGGTCTTGTTCACGGTGATTTAACAACATCAAATATGTTACTGAAGAGTGACGCCAAGCAGTTGGTTCTTATTGATTTTGGATTGAGCTTCACTTCAACTCTACCAGAAGATAAAGCTGTTGATTTGTATGTTCTGGAAAGAGCTCTTATTTCAATGCATTCTTCGTGTGGGAACGTGATGGATCAGATACTTGCTGCTTACAAGAAGTCATCAAAGCAGTGGTCTTCCACATTGAACAAGCTAGCACAAGTGAGACAAAGAGGACGAAAGAGGACAATGGTTGGATGA 681 0.4288 METEADSRDSSLILLKQGAEARVFESSFVGRKSVVKERFSKKYRHPILDSKLTLKRLNAEARCMTKARRLGVRTPVLYAVDPVLHTLTFEYVEGPSVKDVLLEFGSRGGDREWLDNIASQIGDAIGKLHDGGLVHGDLTTSNMLLKSDAKQLVLIDFGLSFTSTLPEDKAVDLYVLERALISMHSSCGNVMDQILAAYKKSSKQWSSTLNKLAQVRQRGRKRTMVG 226
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca01g00605 226 ProSitePatterns Tyrosine protein kinases specific active-site signature. 133 145 IPR008266 GO:0004672|GO:0006468
Cca01g00605 226 ProSiteProfiles Protein kinase domain profile. 9 226 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca01g00605 226 PANTHER O-SIALOGLYCOPROTEIN ENDOPEPTIDASE 1 226 IPR022495 GO:0004674
Cca01g00605 226 TIGRFAM arch_bud32: Kae1-associated kinase Bud32 15 220 IPR022495 GO:0004674
Cca01g00605 226 SMART serkin_6 9 225 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca01g00605 226 Pfam Protein kinase domain 55 162 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca01g00605 226 Gene3D Phosphorylase Kinase; domain 1 20 92 - -
Cca01g00605 226 SUPERFAMILY Protein kinase-like (PK-like) 14 174 IPR011009 -
Cca01g00605 226 PANTHER EKC/KEOPS COMPLEX SUBUNIT BUD32-LIKE ISOFORM X1 1 226 - -
Cca01g00605 226 Gene3D Transferase(Phosphotransferase) domain 1 111 223 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca01g00605 Cca-Chr1 7750243 7753343 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca01g00605 55 160 MAP Kinase Kinase Kinase AT5G66710 29.245 3.77e-07 48.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Cca01g00605 Pkinase 8.7e-10 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca01g00605 K08851 - gmx:100782376 410.223