Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca01g00600 ATGCAGCACCCTAAAGCCTCAGTGTTATTGGATTTGTCAAATTACATAGAAGGTTTAAAACATAAGCTGCAAGAGTTGAATCAGTTAACTGTGGCAACAGCACGAAAAATCGTTGACTATGATCCAATGCCTAAGCTTGAAGTTGAAGCACAAGAAGAGGGTTTTGTGATCAAGGTTCTGAGTCAAAGCAGTTGCCAAGGGTTGTTGGTGTTTATATTGGAAGCCTTTGAAGAGCTGGGTCTTGATGTGCTTCAGGCTAGGGTTTCTTGTGCAGACAGCTTCAGTTTAGAAGCTCTCGGAAACAAAGAGAACAATGAAGATACTCGCCCTTTGGATGCACACTTAGTTGAAAAAGTAGTATCTCAAGCTATTCAAAACTGGAGGGAAGTTTCACAGATATAG 402 0.4104 MQHPKASVLLDLSNYIEGLKHKLQELNQLTVATARKIVDYDPMPKLEVEAQEEGFVIKVLSQSSCQGLLVFILEAFEELGLDVLQARVSCADSFSLEALGNKENNEDTRPLDAHLVEKVVSQAIQNWREVSQI 133
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca01g00600 133 PANTHER TRANSCRIPTION FACTOR BHLH93-LIKE PROTEIN 3 131 - -
Cca01g00600 133 Coils Coil 9 29 - -
Cca01g00600 133 PANTHER TRANSCRIPTION FACTOR SCREAM2-RELATED 3 131 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca01g00600 Cca-Chr1 7646423 7648577 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca01g00600 - - gsj:114395807 220.32
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca01g00600 01 7646423 7648577 Cca01g00600 01 7646423 7648577 ECH
Cca01g00600 01 7646423 7648577 Cca05g01655 05 35938490 35939978 ECH
Cca01g00600 01 7646423 7648577 Cca01g01990 01 46469446 46471369 ECH
Cca05g01331 05 31330512 31332682 Cca01g00600 01 7646423 7648577 ECH
Cca07g01714 07 43133252 43135320 Cca01g00600 01 7646423 7648577 ECH
Cca01g01990 01 46469446 46471369 Cca01g00600 01 7646423 7648577 ECH
Cca01g00600 01 7646423 7648577 Cca05g01331 05 31330512 31332682 PCT