Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca01g00599 ATGGCTTTCCATTCGCGTTATAACGTATTTTGCTTCTCTATTTTGTTTTCTCTACTTGCTGTAGCCTCTGCTCAGCTATCTTCAGGTTTCTATGGAAAAACATGCCCCAATGCCCTCTCCACCATAAAATCTGCAGTAAAAAGTGCAGTTGCCAATGAGCATCGCATGGGAGCCTCCTTGCTCCGTCTTCATTTCCATGATTGCTTTGGATGTGATGCATCAGTTCTATTGGATGACACATCGAGCTTCACGGGAGAGAAGTCAGCTGGTGCAAATGTGAATTCTTTGAGGGGTTTTGATGTAATTGACGACATCAAAAGTCAGTTGGAGACTGCTTGCCCTGGAACTGTTTCCTGTGCTGATATCTTAGCTGTTGCTGCTCGAGATTCTGTCGTGGCATTGGGTGGTCCATCATGGACTGTTGGCTTAGGCAGAAGAGATTCAACCACTGCAAGTAAAGATGCTGCCACTAATGATATCCCATCACCTCTAATGGATCTGAGTGATCTCATAACATCTTTTTCAAATAAGGGGTTTACCGCCCAAGAGATGGTAGTCCTCTCAGGAGCACATACAACAGGGCAAGCCAAATGCCAGTTCTTCCGGGGTAGAATTTACAATGAAACAAACATTGATTCAGATTTTGCGACATCAGTGAAGTCAAACTGTCCAAGCACTGATGGTGACAGCAACCTCTCCCCACTTGATGTCACCACCAATGTGTTATTTGACAATGCTTATTTCAAGAATCTAGTGAACAATAAAGGGCTTCTGCATTCTGATCAGCAACTCTTCAGTGGTGGTTCCACAGATTCTCAGGTCACTACCTATAGCACCAGTTCTTCAACTTTCTATGCAGACTTTGCTAGTGCCATGGTCAAAATGGGAAACCTTAGCCCTTTAACAGGGAGCAGTGGCCAAATTCGTACTAACTGCCGTTCAGTGAACTGA 951 0.4437 MAFHSRYNVFCFSILFSLLAVASAQLSSGFYGKTCPNALSTIKSAVKSAVANEHRMGASLLRLHFHDCFGCDASVLLDDTSSFTGEKSAGANVNSLRGFDVIDDIKSQLETACPGTVSCADILAVAARDSVVALGGPSWTVGLGRRDSTTASKDAATNDIPSPLMDLSDLITSFSNKGFTAQEMVVLSGAHTTGQAKCQFFRGRIYNETNIDSDFATSVKSNCPSTDGDSNLSPLDVTTNVLFDNAYFKNLVNNKGLLHSDQQLFSGGSTDSQVTTYSTSSSTFYADFASAMVKMGNLSPLTGSSGQIRTNCRSVN 316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca01g00599 316 CDD secretory_peroxidase 25 315 IPR033905 GO:0004601|GO:0042744
Cca01g00599 316 Gene3D Peroxidase, domain 2 161 295 - -
Cca01g00599 316 SUPERFAMILY Heme-dependent peroxidases 25 316 IPR010255 GO:0004601|GO:0006979|GO:0020037
Cca01g00599 316 Gene3D - 30 313 - -
Cca01g00599 316 PANTHER PEROXIDASE 18 316 - -
Cca01g00599 316 ProSitePatterns Peroxidases active site signature. 57 68 IPR019794 GO:0004601
Cca01g00599 316 PRINTS Plant peroxidase signature 116 126 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cca01g00599 316 PRINTS Plant peroxidase signature 35 54 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cca01g00599 316 PRINTS Plant peroxidase signature 97 110 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cca01g00599 316 PRINTS Plant peroxidase signature 135 150 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cca01g00599 316 PRINTS Plant peroxidase signature 59 79 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cca01g00599 316 PRINTS Plant peroxidase signature 250 267 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cca01g00599 316 PRINTS Plant peroxidase signature 182 194 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cca01g00599 316 PRINTS Plant peroxidase signature 234 249 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cca01g00599 316 PRINTS Plant peroxidase signature 290 303 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cca01g00599 316 Pfam Peroxidase 43 279 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cca01g00599 316 PRINTS Haem peroxidase superfamily signature 135 147 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cca01g00599 316 PRINTS Haem peroxidase superfamily signature 117 134 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cca01g00599 316 PRINTS Haem peroxidase superfamily signature 236 251 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cca01g00599 316 PRINTS Haem peroxidase superfamily signature 183 198 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cca01g00599 316 PRINTS Haem peroxidase superfamily signature 57 71 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cca01g00599 316 PANTHER PEROXIDASE 72-RELATED 18 316 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cca01g00599 316 ProSiteProfiles Plant heme peroxidase family profile. 25 316 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca01g00599 Cca-Chr1 7620329 7622775 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca01g00599 21 316 Peroxidase AT5G05340 63.667 6.47e-137 389
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca01g00599 K00430 - gmx:100818176 549.666
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca01g00599 01 7620329 7622775 Cca01g00599 01 7620329 7622775 ECH
Cca01g00599 01 7620329 7622775 Cca05g01661 05 35987677 35990083 ECH
Cca01g00599 01 7620329 7622775 Cca05g01335 05 31374017 31376570 PCT