Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca01g00596 ATGGCTTCTAAGATCCAATATCTGTTTGTGCTTGTTTTAGCATTTATGATCCCTTCAAATGCAAAGCTAAGTCCTAAATTCTATAACAAAATTTGTCCCCAGGCATTGCCAATCATAAGATCAGTGGTTCATCGAGCCATTATTCGTGAACGTCGCATTGGAGCATCCTTGCTGCGTTTGCATTTCCATGACTGCTTTGTTAATGGTTGTGATGGATCAGTTTTGCTGGATGACACAAGGAACTTCACTGGAGAGAAGACAGCCCTACCAAATCTGAATTCAATAAGAGGCTTCGAAGTGGTTGATGAGATTAAGGCAGCAGTTGACAAAGCTTGCAAACGACCTGTCGTATCATGTGCTGATATCTTAGCTACAGCTGCTCGTGATTCTGTTGCCATATTAGGTGGTCGACTCCTATGGTACCCAGTATCACTAGGCAGAAGAGACTCTAGAACTGCAAGCAGGGACGCTGCAAACACCAACCTCCCTCCTCCATTCTTCAGCTTCTCACAGCTTCTCTCCAACTTCGTCTCTCACGGACTTGGCCTCAAGGACCTCGTGGCACTCTCTGGTGGCCACACTCTAGGGTTCGCCAGGTGCACCACCTTCAGAAACCGCATCTACAATGACACCAACATAAACCCTACCTTTGCAGCCTCTTTGCGCAAAACGTGCCCTAGAGTTGGCGACGACAACAACCTGGCTCCGTTGGACCAAACTCCTGCGAGGGTCGACACCTCTTACTTCAAGGAGTTGATGTGCAAAAAGGGTGTCCTTCATTCGGATCAAGAACTGTACAAGGGGAATGGAAGTGAAAGTGACAGGTTGGTGGAGCTATATAGCAGAAACCCTTTTGCGTTTGCGAAAGACTTTAAGGGTTCTATGATCAAGATGGGGAACATTAAGCCTCTCACTGGGAACATGGGAGAGATCAGACGCAATTGCAGAAGAGTTAATTAG 960 0.4667 MASKIQYLFVLVLAFMIPSNAKLSPKFYNKICPQALPIIRSVVHRAIIRERRIGASLLRLHFHDCFVNGCDGSVLLDDTRNFTGEKTALPNLNSIRGFEVVDEIKAAVDKACKRPVVSCADILATAARDSVAILGGRLLWYPVSLGRRDSRTASRDAANTNLPPPFFSFSQLLSNFVSHGLGLKDLVALSGGHTLGFARCTTFRNRIYNDTNINPTFAASLRKTCPRVGDDNNLAPLDQTPARVDTSYFKELMCKKGVLHSDQELYKGNGSESDRLVELYSRNPFAFAKDFKGSMIKMGNIKPLTGNMGEIRRNCRRVN 319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca01g00596 319 ProSiteProfiles Plant heme peroxidase family profile. 22 319 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cca01g00596 319 Gene3D Peroxidase, domain 2 163 298 - -
Cca01g00596 319 SUPERFAMILY Heme-dependent peroxidases 23 319 IPR010255 GO:0004601|GO:0006979|GO:0020037
Cca01g00596 319 Pfam Peroxidase 40 283 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cca01g00596 319 ProSitePatterns Peroxidases proximal heme-ligand signature. 185 195 IPR019793 -
Cca01g00596 319 Gene3D - 26 316 - -
Cca01g00596 319 ProSitePatterns Peroxidases active site signature. 54 65 IPR019794 GO:0004601
Cca01g00596 319 PANTHER CATIONIC PEROXIDASE 4 318 - -
Cca01g00596 319 CDD secretory_peroxidase 22 318 IPR033905 GO:0004601|GO:0042744
Cca01g00596 319 PRINTS Haem peroxidase superfamily signature 54 68 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cca01g00596 319 PRINTS Haem peroxidase superfamily signature 117 134 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cca01g00596 319 PRINTS Haem peroxidase superfamily signature 137 149 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cca01g00596 319 PRINTS Haem peroxidase superfamily signature 185 200 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cca01g00596 319 PRINTS Haem peroxidase superfamily signature 237 252 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cca01g00596 319 PRINTS Plant peroxidase signature 32 51 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cca01g00596 319 PRINTS Plant peroxidase signature 56 76 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cca01g00596 319 PRINTS Plant peroxidase signature 96 109 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cca01g00596 319 PRINTS Plant peroxidase signature 116 126 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cca01g00596 319 PRINTS Plant peroxidase signature 184 196 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cca01g00596 319 PRINTS Plant peroxidase signature 235 250 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cca01g00596 319 PRINTS Plant peroxidase signature 251 268 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cca01g00596 319 PRINTS Plant peroxidase signature 293 306 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cca01g00596 319 PANTHER PEROXIDASE 72-RELATED 4 318 IPR000823 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca01g00596 Cca-Chr1 7563839 7567347 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca01g00596 21 319 Peroxidase AT5G05340 57.616 1.31e-119 345
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca01g00596 K00430 - gmx:100812163 561.607
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca01g00596 01 7563839 7567347 Cca05g01337 05 31388964 31392885 PCT