Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cca01g00583 | ATGGGAAACAACAGGTTCAGATTGTCTGATATGATGCCAAATGCATGGTTTTATAAGCTCAAAGACATGAGCAAATCAAGGAAGAGAAATGGCCCTCATGCTATGAAGAACAAAGTAACCTCACCAACAACAACATCCCAAAGGTGCTCAAATTATTTCCCCAGTGAACCAAACATAGCTGGTAAGTTATACAACTCTCCTATTTTCACTAAACACTCAGACAACACATTCTCTGATTCACCAAGAAGGTCATCATCCAAGAGAAGGGGTAAGAGAAAAACCATTTACAAGCCTTCTCCCACCACACTTGTCTCTTCACCAGTCATAGAAAGTTTTAGTTGTCATTCCACAAACAATTGGATCAAGCCAAATCAACCTCATTCTCCAGACTATTATCTCTCCTCCTTAGAGAGTTCTTCTGAATCAAACAATGAATATGTTTCATCCGAGTCTGAGTGTGATAAGTTCACCATTCCTGACCTGCTTAATGGGGTAGCCTCTGAATGCAGTTGTAGAGTTAGCTCTTCCACCAACGACATCATCATTGACATGAAAAATGAACCCTTCCCTGAAAATCTTGATGGCTTTGATACAATTTCACAACTAGGCCTTGCTCCAATATTGACAAAGCCAGTGAAGTTTGATGACAAGGTCAACGAAGCCACTGAGTTGAGAAGATCAACTCTATTTGATGAGGTAAAGGCTCATCAATCTCTATCTGTCAAAGTTGGAAAAGAGGAAAGCAGTAGAACTAAGAGAGAGAGAAAAACAAGTTCAATTGCTAGAATTTCATCTGCTAACTCTACAGAATTTCCAGAGGGATTTGCAGTTGTTAAGTCCTCACTTGATCCACAAAGAGACTTCAGGGACTCAATGGTGGAGATGATTGTGGAGAACAATATTTGTGCGTCGAAAGATTTGGAGAACTTGCTTGCCTGCTATCTTTCACTGAATTCAAGGGAATACCATGATCTCATTGTCAAAGCTTTTGAGCAGATTTGGTATGACATGGCTCAACTCAGAATGTAA | 1029 | 0.3994 | MGNNRFRLSDMMPNAWFYKLKDMSKSRKRNGPHAMKNKVTSPTTTSQRCSNYFPSEPNIAGKLYNSPIFTKHSDNTFSDSPRRSSSKRRGKRKTIYKPSPTTLVSSPVIESFSCHSTNNWIKPNQPHSPDYYLSSLESSSESNNEYVSSESECDKFTIPDLLNGVASECSCRVSSSTNDIIIDMKNEPFPENLDGFDTISQLGLAPILTKPVKFDDKVNEATELRRSTLFDEVKAHQSLSVKVGKEESSRTKRERKTSSIARISSANSTEFPEGFAVVKSSLDPQRDFRDSMVEMIVENNICASKDLENLLACYLSLNSREYHDLIVKAFEQIWYDMAQLRM | 342 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cca01g00583 | 342 | MobiDBLite | consensus disorder prediction | 36 | 51 | - | - | |
Cca01g00583 | 342 | Pfam | DNA-binding domain | 1 | 42 | IPR025830 | GO:0003677 | |
Cca01g00583 | 342 | Pfam | Transcriptional repressor, ovate | 281 | 337 | IPR006458 | - | |
Cca01g00583 | 342 | TIGRFAM | A_thal_3678: uncharacterized plant-specific domain TIGR01568 | 275 | 337 | IPR006458 | - | |
Cca01g00583 | 342 | PANTHER | TRANSCRIPTION REPRESSOR OFP1-LIKE | 3 | 341 | - | - | |
Cca01g00583 | 342 | MobiDBLite | consensus disorder prediction | 72 | 101 | - | - | |
Cca01g00583 | 342 | ProSiteProfiles | OVATE domain profile. | 277 | 336 | IPR006458 | - | |
Cca01g00583 | 342 | MobiDBLite | consensus disorder prediction | 26 | 51 | - | - | |
Cca01g00583 | 342 | PANTHER | TRANSCRIPTION REPRESSOR OFP7-RELATED | 3 | 341 | IPR038933 | GO:0045892 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Cca01g00583 | Cca-Chr1 | 7402418 | 7403552 | Dispersed/Wgd |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | OFP | Cca01g00583 | Ovate | 1e-24 | No_clan |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cca01g00583 | - | - | gmx:100784032 | 524.628 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Cca01g00583 | 01 | 7402418 | 7403552 | Cca01g00583 | 01 | 7402418 | 7403552 | ECH | |
Cca01g00583 | 01 | 7402418 | 7403552 | Cca05g01352 | 05 | 31613801 | 31616570 | PCT |