Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca01g00566 ATGGTTGTGGGGATACCTTTCCTTGTCCTATTTGCATCCACTTTGAGTTTAGCTTTTCTACTCTCAAAATGGCTCTCAAAAAGTCAAACAAAAAATGTTCCAAAAGGGTCTCTGGGGTACCCTATCATCGGAGAGACACTTAGTTTTCTTAAAGCACAGAGACAAGACAAGGGTTCTGATTGGTTGGAGGAACGGATATCTAAGTATGGTCCTGTCTTCAAAACCTCTTTAATGGGGTCCCCTACAGTGTTTGTTATTGGACAAGCAGGAAATAAATTTGTCCTTGGTTCACCACAAGATGTGCTTTCTGCTAAGAAACCACTCACCCTACAAAAGATACTTGGAAGGCAAAGCTTAGTTGAACTTACAGGACCCAGGTACAAGTTAGTCAAAGGGGAAATGATCAAATTCTTGAAACCTGAATGCCTCCAGAACTATGTCAAAAAGATGGATGAATTGGTGAGTGCTACATTACTGAGAGAATTCAGAGAGAATGAAGCAATGGGAGTTGTGGTCTTCATGAAGAAACTTTCCTATGATATAGCATGCAATATATTGTTTGACATCAAGGATGAGTACACAAGGGAGGCTTTGTTTGAAGATTTTACTTTAGCATTCAAAGCAATTCATTCTCTTCCCATCAATTTCCCTGGTACCACATTTTGGAAAGGCCAAAGGGCCAGGGCAAGAATTGTTGATAGGATGCTTCCTATTATGAACAGAAGAAGGGAGGAACTGTCAAAGGGAGTTCTAAGCTCTACTAATGACATGCTTTCTTGTCTGCTTGCACTGAGGGATGAAAATCACCAACCTCTAGCTGATGATTTAATTACTGACAACTTTATTTTCTTGTTTGTTGCTAGTCATGACACATCTGCCACTCTTATGAGCTTGATGATATGGAAGTTATCTAGAGATCCAGAGGTTTACAATAAAGTTTTAGAAGAACAAATGGAAATTATAAAGCAAAGGGAAGGAAAAGAAGAGAGGTTAACATGGGCAGAGTTACAAAAGATGAAATACACATGGAGAGTTGCTCAGGAATTGATGAGGATGATCCCTCCCTTGTTTGGCAGCTTTAGGAAGGCACTTAAAGATACTAACTACGAAGGATATGACATACCAAAAGGGTGGCAGGTGTATTGGGCAGCATATGGAACACATATGAAGGATGATATATTTGAGGATCCACACAAGTTTGATCCATCTCGTTTTGAGAATCCACCCAAGCCAATTCCACCTTTTTCTTACCTTCCATTTGGTGCAGGGATTCATTATTGCATAGGAAACGAGTTTGCTAGGATTGAGACCTTGACCACTATTCACAACTTTGTAAAATTGTATGAATGGTCTCAAGTAAGCCCAGAGGAAGCAATTACTCGTCAACCAATGCCATATCCATCCATGGGTCTCCCAATTAAGATCAAACCCAGATGTAGCATGTCTTAA 1449 0.3996 MVVGIPFLVLFASTLSLAFLLSKWLSKSQTKNVPKGSLGYPIIGETLSFLKAQRQDKGSDWLEERISKYGPVFKTSLMGSPTVFVIGQAGNKFVLGSPQDVLSAKKPLTLQKILGRQSLVELTGPRYKLVKGEMIKFLKPECLQNYVKKMDELVSATLLREFRENEAMGVVVFMKKLSYDIACNILFDIKDEYTREALFEDFTLAFKAIHSLPINFPGTTFWKGQRARARIVDRMLPIMNRRREELSKGVLSSTNDMLSCLLALRDENHQPLADDLITDNFIFLFVASHDTSATLMSLMIWKLSRDPEVYNKVLEEQMEIIKQREGKEERLTWAELQKMKYTWRVAQELMRMIPPLFGSFRKALKDTNYEGYDIPKGWQVYWAAYGTHMKDDIFEDPHKFDPSRFENPPKPIPPFSYLPFGAGIHYCIGNEFARIETLTTIHNFVKLYEWSQVSPEEAITRQPMPYPSMGLPIKIKPRCSMS 482
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca01g00566 482 Gene3D Cytochrome P450 24 478 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca01g00566 482 PANTHER CYTOCHROME P450 26 6 476 - -
Cca01g00566 482 PANTHER CYTOCHROME P450 FAMILY PROTEIN 6 476 - -
Cca01g00566 482 PRINTS E-class P450 group IV signature 60 83 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca01g00566 482 PRINTS E-class P450 group IV signature 339 355 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca01g00566 482 PRINTS E-class P450 group IV signature 388 406 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca01g00566 482 PRINTS E-class P450 group IV signature 411 427 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca01g00566 482 PRINTS E-class P450 group IV signature 427 445 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca01g00566 482 SUPERFAMILY Cytochrome P450 29 478 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca01g00566 482 Pfam Cytochrome P450 34 457 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca01g00566 482 PRINTS P450 superfamily signature 287 304 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca01g00566 482 PRINTS P450 superfamily signature 344 355 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca01g00566 482 PRINTS P450 superfamily signature 418 427 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca01g00566 482 PRINTS P450 superfamily signature 427 438 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca01g00566 482 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 420 429 IPR017972 GO:0005506|GO:0016705
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca01g00566 Cca-Chr1 7175719 7179513 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca01g00566 1 453 Cytochrome P450 AT4G19230 33.772 1.88e-77 248
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca01g00566 - - gmx:100790209 880.167