Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca01g00562 ATGTTAGTATGTTATCCCAGTGACACATCCCTTCATATTGGTAGTGAGTTCTTGAGAAAACAAGATGCAACTTTTGCATCAAGATCACTAAGCAAGTGCAGTGATCTCATCAGTGGTGGATACTTAACCACAATTAATTTAGTGCCATATGGGGACCAATGGAAGAAAATGAAGAAAATCTTAGCCAATGATTTGCTTTCCCCGCAGAAGCACCTATGGCTCCATGACAAAAGGACTGAAGAAGCTAATAACCTAATGTTTTACTTCTACAACAAATGCATAAATGTGAATATGATGGTGTTGGTGGCCTTGATATGTGAAGAGGAACAGATCCGCGACGTTTTTTCTTTTGGCATTTTAACAATTGCAAAGGGTGGTGGCGTTTCGGTGAATCTTTCACATGGAATGGTGCTTGGCATTTTAAGTGGGAATAAGAAGTGGGTTTTGACTGCAAGAGAACCTTTTCGCCTTCATTCCAATGCATCTTTTGTTCCTCCTCATGTCTCTATGAGTGACACAACGGTGGACAATTACTTCATCTCTAAGGGTTGCTGTGTGGCTTCACTTGGAAGCACCACCCAATGTTTTAACAATATCAACCTTGCTGAGTCCAACAATGATATGCTTCTTGCTGAGCCACTTGTGGCAGTTGCTAAGTCAAGATTAGCACCAGAACTATACTGCCTTTAA 690 0.4087 MLVCYPSDTSLHIGSEFLRKQDATFASRSLSKCSDLISGGYLTTINLVPYGDQWKKMKKILANDLLSPQKHLWLHDKRTEEANNLMFYFYNKCINVNMMVLVALICEEEQIRDVFSFGILTIAKGGGVSVNLSHGMVLGILSGNKKWVLTAREPFRLHSNASFVPPHVSMSDTTVDNYFISKGCCVASLGSTTQCFNNINLAESNNDMLLAEPLVAVAKSRLAPELYCL 229
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca01g00562 229 PANTHER P450 FAMILY PROTEIN, PUTATIVE-RELATED 150 186 - -
Cca01g00562 229 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 12 104 - -
Cca01g00562 229 SUPERFAMILY Cytochrome P450 15 187 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca01g00562 229 PANTHER P450 FAMILY PROTEIN, PUTATIVE-RELATED 12 104 - -
Cca01g00562 229 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 150 186 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca01g00562 Cca-Chr1 7125572 7128735 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca01g00562 152 186 Cytochrome P450 AT2G22330 60.000 7.34e-06 44.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca01g00562 - K14984 vra:106778952 132.88