Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca01g00557 ATGGCAGTGGTGGACAATCCAACACAGGCATCTGAATGGGCACTAGCAGAAATGATAAACCAGCCAAAATTGCTTGAACGAGCCATGGAAGAATTGGACAACGTGGTAGGTCTAAAGAGACTAGTTCAAGAATCAGATATTCCTAAGCTCAGCTTTTTGAAGGCTTGCGTGAAAGAAACTTTTCGGCTTCATCCCGTTGTGCCTTTCACTATTCCTCATGTTTGTATGGAGGATACAGTGGTTGCTGATTACTTGATCCCAAAGGGTAGTCATATACTACTGAGTAGAAGTGGTCTTGGAAGAAATCCAAAAGTGTGGCAGGAACCCCTCAAATTCAAACCAGAACGCCACCTCAAGAGTGATGGGTCAGATGTAGTTATGACAGAGCCAAATTTAAGGTTCATTTCATTCAGCACAGGAAGGCGCGGTTGTCCTGGAATAATGCTTGGCACCACAATAACTGTAATGTTGTTGGCTAGGTTGCTCCATGGCTTCACTTGGACTGCACCTCCTAATGTGTCAATCATCAATCTTGCTGAGTCCAAAGCAGATATGTTTCTTGCTCAGCCACTAGTCGCAGTAGCAAGACCAAGATTACCTGCAGAATTATACCACACCAAGTGA 624 0.4423 MAVVDNPTQASEWALAEMINQPKLLERAMEELDNVVGLKRLVQESDIPKLSFLKACVKETFRLHPVVPFTIPHVCMEDTVVADYLIPKGSHILLSRSGLGRNPKVWQEPLKFKPERHLKSDGSDVVMTEPNLRFISFSTGRRGCPGIMLGTTITVMLLARLLHGFTWTAPPNVSIINLAESKADMFLAQPLVAVARPRLPAELYHTK 207
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca01g00557 207 Pfam Cytochrome P450 2 189 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca01g00557 207 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 137 146 IPR017972 GO:0005506|GO:0016705
Cca01g00557 207 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 1 204 - -
Cca01g00557 207 PRINTS E-class P450 group I signature 144 167 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca01g00557 207 PRINTS E-class P450 group I signature 134 144 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca01g00557 207 PRINTS E-class P450 group I signature 54 72 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca01g00557 207 PRINTS E-class P450 group I signature 95 119 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca01g00557 207 PRINTS E-class P450 group I signature 11 37 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca01g00557 207 SUPERFAMILY Cytochrome P450 5 198 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca01g00557 207 PANTHER P450 FAMILY PROTEIN, PUTATIVE-RELATED 1 204 - -
Cca01g00557 207 Gene3D Cytochrome P450 1 202 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca01g00557 Cca-Chr1 7070965 7071588 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca01g00557 1 206 Cytochrome P450 AT4G39950 62.621 2.52e-88 269
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca01g00557 - K14984 pvu:PHAVU_006G0788000 328.561