Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca01g00458 ATGGTAAATTGTAGAGACAACATGCAAGTGCTTAAAGCGGGACTCGAGAAAACAGGACGGTTTGACATAGTGTCGAAAGAGAATGGTGTGCCTTTGGTGGCTTTCTCACTGAAAGACAACACCCACTTTGACGAATTCCAAATCTCTGAACTGCTGAGACGCTCTGGGTGGATAGTGCCAGCATACACCATGCCCCAAGATGCTCAACGCATCACAGTGATTCGTGTCGTCATCAGGGAAGACTTCTCAAGGAGCCTTGCAGAGCGTCTTGTGGCTGATGTGGAGAAAGTGCTGCAAGAGCTTGACTCACTTCCAGCAAGGGTGATAAGTAGCAACACCATTGTCACAGTCAATGCAATAGAAGATGGCAAGGTACTGGTTGCTAAGAAGAGTGCTCTGGAGACACAGAGGGAAATCACTACAGTTTGGAAGAAGTTTGTGTCGGAGAGGAAGAAGCTGAATGACAAGATGAATGGTGTGTGTTAG 486 0.4712 MVNCRDNMQVLKAGLEKTGRFDIVSKENGVPLVAFSLKDNTHFDEFQISELLRRSGWIVPAYTMPQDAQRITVIRVVIREDFSRSLAERLVADVEKVLQELDSLPARVISSNTIVTVNAIEDGKVLVAKKSALETQREITTVWKKFVSERKKLNDKMNGVC 161
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca01g00458 161 SUPERFAMILY PLP-dependent transferases 3 101 IPR015424 -
Cca01g00458 161 Gene3D - 18 105 - -
Cca01g00458 161 PANTHER GLUTAMATE DECARBOXYLASE 1 161 - -
Cca01g00458 161 PANTHER GLUTAMATE DECARBOXYLASE 1 161 IPR010107 GO:0004351|GO:0006536|GO:0030170
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca01g00458 Cca-Chr1 5697729 5698305 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca01g00458 1 154 Calmodulin-binding Proteins AT2G02000 65.584 2.84e-65 205
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca01g00458 K01580 - gmx:100796533 261.536