Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca01g00433 ATGTCCACTGTGCGAGTTCAAGTCTCGGCGTGCGCGCTTACCGCCACCGTCAACCACCTTCGCCTCCGCCCAAACGCCGTCGTTTCATTCCCCAACAATTTCGCTCTCAGGAAGAAGCCTCTCAGGGTGCTCTCAATGTCCTCCCTTCCTCCTTCCCAACCCTTCGAAGTCGCCGTTAAAGCTTCCGTCACCACACCTAACAGGCTCGGCGATTGCCCTTTTTGCCAAAGGGTGTTGTTGACACTGGAGGAAAAACATCTTCCTTATGACCCCAAGTTGGTGGATTTGACCAACAAGCCAGAATGGTTCCTTAAAGTTAATCCTGACGGTAAAGTTCCTGTTATAAAGTTTGATGAGAAGTGGGTTCCCGATTCAGATGTTATTACACAAACATTGGAAGAGAAGTATCCTAGCCCACCATTGGTGACCCCACCTGAAAAGGCAACAGTGGGGTCAAAGATCTTTTCTACATTTATTGGATTTCTCAAGAGCAAGGATCCCAATGATGGAACAGAGCAGGCATTACTAACTGAATTGAGCTCTTTCAATGATTACATCAAGGAAAATGGTCCTTTCATCAACGGTAAAGAGATATCTGCTGCTGACCTTTCACTTGCACCAAAGCTATACCATTTGGAGATTGCTTTGGGGCATTATAAGAAATGGACAGTGCCTGATTCACTTACCTATTTGAAGTCTTATACGAAGGCCATTTTCTCGAGGGAATCGTTCATTAAAACAAGTGCACAACCACAGGATGTCATTGAAGGTTGGCGTCCTAAAGTGGAGGGCTAA 795 0.4616 MSTVRVQVSACALTATVNHLRLRPNAVVSFPNNFALRKKPLRVLSMSSLPPSQPFEVAVKASVTTPNRLGDCPFCQRVLLTLEEKHLPYDPKLVDLTNKPEWFLKVNPDGKVPVIKFDEKWVPDSDVITQTLEEKYPSPPLVTPPEKATVGSKIFSTFIGFLKSKDPNDGTEQALLTELSSFNDYIKENGPFINGKEISAADLSLAPKLYHLEIALGHYKKWTVPDSLTYLKSYTKAIFSRESFIKTSAQPQDVIEGWRPKVEG 264
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca01g00433 264 Gene3D Glutaredoxin 54 141 - -
Cca01g00433 264 Pfam Glutathione S-transferase, N-terminal domain 71 140 IPR004045 -
Cca01g00433 264 Gene3D - 142 264 - -
Cca01g00433 264 CDD GST_C_DHAR 141 261 - -
Cca01g00433 264 PANTHER GLUTATHIONE S-TRANSFERASE DHAR3, CHLOROPLASTIC 1 263 - -
Cca01g00433 264 CDD GST_N_family 72 133 - -
Cca01g00433 264 PANTHER GLUTATHIONE S-TRANSFERASE DHAR2-RELATED 1 263 IPR044627 GO:0033355|GO:0045174|GO:0098869
Cca01g00433 264 SFLD Main (cytGST) 71 238 - -
Cca01g00433 264 SFLD Glutathione Transferase (cytosolic) 71 238 IPR040079 -
Cca01g00433 264 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 62 140 IPR004045 -
Cca01g00433 264 SUPERFAMILY GST C-terminal domain-like 135 261 IPR036282 -
Cca01g00433 264 SUPERFAMILY Thioredoxin-like 71 138 IPR036249 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca01g00433 Cca-Chr1 5294100 5299815 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca01g00433 1 264 Glutathione S-transferase Gene Family AT5G16710 64.662 1.97e-127 360
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca01g00433 K21888 - gmx:732557 486.493