Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cca01g00405 | ATGTTCCGGTTGGTTATCTACATGGGATTATGGGGTTCATTATATGGTGGGGTTTCTGGTGCCTTGTACTCGTGCATCGGTGATAACTTTCTTTATGGTTGTTCAATGCCAAGTCTTCCCAAATGCAGAAATAATGATAGTTTATATTTGGGTAATTGGAGTAGCTATGGGGTAATGTCAAGTAAGGGGTTCGTATTTGATGAAAGTGAAAATCTCAGCAATTTTGATTGCTGGATGAAGTGCTTGAATAATTGCACGTGTGAGGCTTACTCTTATGTGAATGAGGATGCAACTGGCTGTGAGATTTGGAGTAAGGACTCTGCAAAATTTGTTGCCACTAATAATTTCACAGCTGGGGGCCGTCATATCTACTTCCTTCGCAAGAAAAAAGCCGAAAATCGTAAGAAGCGAACAATGTTATTGTCTGAAATTGGAGGAAACACTGCAAAATCCATTGTATACAGTGAAAGAAGAGAACATAGGAAAGAAAAAAGGAGAAATGATGATACACATATATTTGACCTTCAAACCATTCTTGAGGCAACCTCTAATTTTTCTTCCACCAATAAGATAGGGGAGGGTGGCTTTGGACCTGTCTACAAGGGAAAGCTACCAAATGGGCAAGAAGTAGCTATAAAAAGGCTTTCCAAAAGTTCGGGACAGGGGTTGATAGagttcaaaaatgaagcgatgctaattgtgaaactccaacacactaacttagtgaagctacttggtttttgcatcgacaaagaagaaaggatattagtttatgagtacttgcctaacAAAAGTTTGAATTTATATCTCTTCGTAGATTCCAACAAAAAGAGTGTATTAGATTGGAAGATAAGATGCAAAATCATAGAAGGAATTGCTCAAGGACTCGTATATTTACACCAATATTCAAGATTGAAAGTGATACATAGAGACTTGAAGGCAAGCAACATTTTATTGGATAATGAATTGAATCCAAAGATATCAGATTTTGGCATGGCTCGAATATTCGGGTTAATAGAATCTGAAGAATTAACTAATCGAATTGTTGGAACATATGGTTATATGTCTCCGGAGTACGCAATGATGggtgtcatctcaactaaaactgatgtttatagttttggcatcttattgttagagatTCTAAGTGGAAAGAAAAATCGTAACGATTACCCATTCAATCTTGTTGTTTATGCCTGGAAATTATGGAATGAAGGTGAAGGTCTAATGTTAATGGACAGGGCATTGGGTGGATCATACCCACCTATCCAAGTGTTACGCTACATTCATGTTGGTCTCTTATGCACACAAGATCAAGCAAGTGATAGACCCACTATGCTTGAGGTTGTTTCTTTTCTTTCAAATGAAACTGCCCATTTACCACCACCAAAACAACCAGGACTATGTATCTTTGAAGACATGGAAGAGGTAGAACAACTCAATAGTTGTTCCATAAATGATACAACAGATTCATTAACATCAGAACAGAGGAGAGATGGAAGAACAAGTGATGTTATGTATTTTTTCGACTTTCAAACTATTCTTGAGGAACCTACTAATTTTTCTTCCTCCAATAAGATAGGGGAGGGTGGCTTTGGACCTGTTTACAAGGGAAAGCTGCCAAGTGGACAAGAAATA | 1638 | 0.3407 | MFRLVIYMGLWGSLYGGVSGALYSCIGDNFLYGCSMPSLPKCRNNDSLYLGNWSSYGVMSSKGFVFDESENLSNFDCWMKCLNNCTCEAYSYVNEDATGCEIWSKDSAKFVATNNFTAGGRHIYFLRKKKAENRKKRTMLLSEIGGNTAKSIVYSERREHRKEKRRNDDTHIFDLQTILEATSNFSSTNKIGEGGFGPVYKGKLPNGQEVAIKRLSKSSGQGLIEFKNEAMLIVKLQHTNLVKLLGFCIDKEERILVYEYLPNKSLNLYLFVDSNKKSVLDWKIRCKIIEGIAQGLVYLHQYSRLKVIHRDLKASNILLDNELNPKISDFGMARIFGLIESEELTNRIVGTYGYMSPEYAMMGVISTKTDVYSFGILLLEILSGKKNRNDYPFNLVVYAWKLWNEGEGLMLMDRALGGSYPPIQVLRYIHVGLLCTQDQASDRPTMLEVVSFLSNETAHLPPPKQPGLCIFEDMEEVEQLNSCSINDTTDSLTSEQRRDGRTSDVMYFFDFQTILEEPTNFSSSNKIGEGGFGPVYKGKLPSGQEI | 546 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cca01g00405 | 546 | Gene3D | Transferase(Phosphotransferase) domain 1 | 261 | 460 | - | - | |
Cca01g00405 | 546 | CDD | STKc_IRAK | 191 | 453 | - | - | |
Cca01g00405 | 546 | Pfam | PAN-like domain | 72 | 106 | IPR003609 | - | |
Cca01g00405 | 546 | ProSiteProfiles | Protein kinase domain profile. | 185 | 453 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cca01g00405 | 546 | SUPERFAMILY | Protein kinase-like (PK-like) | 168 | 471 | IPR011009 | - | |
Cca01g00405 | 546 | SMART | serkin_6 | 185 | 453 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cca01g00405 | 546 | PANTHER | RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 | 496 | 546 | - | - | |
Cca01g00405 | 546 | PANTHER | RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 | 56 | 473 | - | - | |
Cca01g00405 | 546 | PANTHER | OS01G0783800 PROTEIN | 496 | 546 | - | - | |
Cca01g00405 | 546 | PANTHER | OS01G0783800 PROTEIN | 56 | 473 | - | - | |
Cca01g00405 | 546 | ProSiteProfiles | PAN/Apple domain profile. | 42 | 129 | IPR003609 | - | |
Cca01g00405 | 546 | Gene3D | Phosphorylase Kinase; domain 1 | 146 | 260 | - | - | |
Cca01g00405 | 546 | Gene3D | Phosphorylase Kinase; domain 1 | 484 | 546 | - | - | |
Cca01g00405 | 546 | Pfam | Protein kinase domain | 186 | 386 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cca01g00405 | 546 | ProSiteProfiles | Prokaryotic membrane lipoprotein lipid attachment site profile. | 1 | 25 | - | - | |
Cca01g00405 | 546 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 307 | 319 | IPR008271 | GO:0004672|GO:0006468 | |
Cca01g00405 | 546 | SMART | ntp_6 | 48 | 128 | IPR003609 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Cca01g00405 | Cca-Chr1 | 4793938 | 4809535 | Dispersed/Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Cca01g00405 | 494 | 546 | Receptor kinase-like Gene Family | AT4G23190 | 49.057 | 5.31e-08 | 53.9 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_DLSV | Cca01g00405 | Pkinase | 1e-44 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cca01g00405 | - | - | pvu:PHAVU_001G233000g | 769.615 |