Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca01g00307 ATGGTTTCTCTTCCCACGCTCCTCTCCTTcgccgccatcctcgccggcttcctcctcctccgccgcgcctcacgccgccgccacctccgcctgccgccgGGGAGCTACGGCCTCCCGTTCATCGGCGAGACGCTGCAGCTGATATCCGCGTACAAGAGCGACAATCCGGAGCCCTTCATGGACGAGCGCGTGCGGCGGTACGGACCGATCTTCTCGACGCACGTGTTCGGCGAGGCGACGGTGTTCTCGGCGGACCCTGAGACGAACCGGTTCATTCTCCAGAACGAAGGGAAGCTTCTGGACTGCAGTTATCCCGGTTCGATATCGAACCTGCTCGGGAAACACTCTCTTCTGTTGATGAAAGGCACTCTCCACAAGAGAATGCACTCACTCACCATGAGCTTCGCCAACTCCTCCATCCTCAAGGATCACCTTCTCCATCACATCGATCGCCTCATCTGCCTCAACCTGGATACCTGGTCCAATCGCGTTCTGCTCATGGAACAGGCCAAGAAGATAACATTTGAGCTGACAGTGAAGCAGTTGATGAGCTTTGACCCTGATGAATGGACTGAGAGTTTAAGGAAAGAGTATGTTCTTGTGATTGAAGGATTCTTCACCGTCCCTTTTCCTCTATTCTCTACCACATACCGCAGAGCCATCAAGGCAAGAACAAAGGTGGCAGAGGCACTAACTTTGGTAGTGAGGCAGAGGAGAAAAGAGTATGAAGATGGAAAAGAGAAAAAGAATGACATGCTTGGGGCACTGTTGGCCTCTGGTGACCACTTTTCCGACGAGCAAATAGTGGATTTTCTGTTGGCTTTGCTCGTCGCCGGTTATGAGACCACCTCTACCATAATGACTCTCGCTATCAAGTTCCTCACTGAGACTCCTCTGGCCTTGGCACAGCTCAAGGAAGAGCATGACCAAATCAGAGCAAGGAGTGACCCACAGGCACCACTGGAATGGACGGATTACAAGTCAATGGCATTTACTCAATGCGTTGTAAATGAGACCTTGAGGGTGGCAAACATAATTGGTGGGATATTTAGGAGAACAACGACAGACATCAACATAAAAGGTTACACTATTCCTAAGGGATGGAAGGTCTTTGCATCATTTCGTGCTGTGCATCTGAATCCTGAACATTATAAAGATGCACGCACATTCAATCCCTGGAGATGGCAGAGTAACTCATCAGAATCAGCAAATCCTGGGAATGTTTATACACCGTTTGGAGGAGGACCACGGTTGTGCCCTGGCTATGAGCTAGCCAGAGTTGTACTTTCTGTCTTCCTTCACCGTTTTGTCACTCGCTTCAGTTGGGTTCCTGGTGAGGAAGATAAGTTGGTGTTTTTCCCAACAACAAGGACGCAGAAGAGGTATCCTATTATTGTGAACCGTAGAGACTAA 1413 0.4678 MVSLPTLLSFAAILAGFLLLRRASRRRHLRLPPGSYGLPFIGETLQLISAYKSDNPEPFMDERVRRYGPIFSTHVFGEATVFSADPETNRFILQNEGKLLDCSYPGSISNLLGKHSLLLMKGTLHKRMHSLTMSFANSSILKDHLLHHIDRLICLNLDTWSNRVLLMEQAKKITFELTVKQLMSFDPDEWTESLRKEYVLVIEGFFTVPFPLFSTTYRRAIKARTKVAEALTLVVRQRRKEYEDGKEKKNDMLGALLASGDHFSDEQIVDFLLALLVAGYETTSTIMTLAIKFLTETPLALAQLKEEHDQIRARSDPQAPLEWTDYKSMAFTQCVVNETLRVANIIGGIFRRTTTDINIKGYTIPKGWKVFASFRAVHLNPEHYKDARTFNPWRWQSNSSESANPGNVYTPFGGGPRLCPGYELARVVLSVFLHRFVTRFSWVPGEEDKLVFFPTTRTQKRYPIIVNRRD 470
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca01g00307 470 Gene3D Cytochrome P450 20 468 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca01g00307 470 PRINTS P450 superfamily signature 278 295 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca01g00307 470 PRINTS P450 superfamily signature 334 345 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca01g00307 470 PRINTS P450 superfamily signature 410 419 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca01g00307 470 PRINTS P450 superfamily signature 419 430 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca01g00307 470 PANTHER CYTOCHROME P450 90A1 11 467 - -
Cca01g00307 470 SUPERFAMILY Cytochrome P450 25 469 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca01g00307 470 Pfam Cytochrome P450 208 451 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca01g00307 470 PANTHER CYTOCHROME P450 26 11 467 - -
Cca01g00307 470 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 412 421 IPR017972 GO:0005506|GO:0016705
Cca01g00307 470 PRINTS E-class P450 group I signature 64 83 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca01g00307 470 PRINTS E-class P450 group I signature 267 284 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca01g00307 470 PRINTS E-class P450 group I signature 287 313 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca01g00307 470 PRINTS E-class P450 group I signature 333 351 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca01g00307 470 PRINTS E-class P450 group I signature 373 397 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca01g00307 470 PRINTS E-class P450 group I signature 409 419 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca01g00307 470 PRINTS E-class P450 group I signature 419 442 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca01g00307 Cca-Chr1 3311200 3316382 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca01g00307 120 470 Cytochrome P450 AT5G05690 79.772 0.0 572
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca01g00307 K09588 - gmx:100789842 854.744
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca01g00307 01 3311200 3316382 Cca05g01594 05 35229919 35234895 PCT