Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca01g00301 ATGGTGGAGGAAAAAAGATATGCGAGAAGTACAGCAGAACATGGTCAGGGTGGTGTGGGAACTCTAACCACTGTGACAAGCAATGCAAGAAATGGGAAGGTGCAAAGTTTGGATGCATGTCACTGGGACTCACGTGGAAGGGCTTGTTTCTGCTACTTCAACTGTCCTGGTTTGTGTGCAAAACGCAGCAACACTTGGTCAGGGTGGTGTGCCAGCTCCAACAACTGTGACAAGCAATGCAGGACTAAGGAAGGTGCAAATCATGGAGCCTGTCATGGTAACATTTTGAAAAGGGCTTGTGACTGTTACTTCAAATGTTAA 321 0.4673 MVEEKRYARSTAEHGQGGVGTLTTVTSNARNGKVQSLDACHWDSRGRACFCYFNCPGLCAKRSNTWSGWCASSNNCDKQCRTKEGANHGACHGNILKRACDCYFKC 106
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca01g00301 106 MobiDBLite consensus disorder prediction 1 24 - -
Cca01g00301 106 Pfam Gamma-thionin family 58 106 - -
Cca01g00301 106 SMART gth_4 58 106 IPR003614 GO:0006952
Cca01g00301 106 PANTHER DEFENSIN-LIKE PROTEIN 1 58 106 - -
Cca01g00301 106 PANTHER DEFENSIN-LIKE PROTEIN 18-RELATED 58 106 - -
Cca01g00301 106 Gene3D - 58 106 IPR036574 -
Cca01g00301 106 Gene3D - 9 55 IPR036574 -
Cca01g00301 106 SUPERFAMILY Scorpion toxin-like 58 106 IPR036574 -
Cca01g00301 106 ProSitePatterns Gamma-thionins family signature. 57 80 IPR008176 GO:0006952
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca01g00301 58 106 Plant Defensins Gene Families AT1G19610 48.980 1.59e-12 56.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca01g00301 - - psom:113336667 78.1814