Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca01g00300 ATGGCCAAGTACTATGATATTGATGATATTATAATGGAGGAAGAGGCTGTGTTAAGTATATTTAAGAAGGCTGCATCTGGAGTGGGAATAGATCCCAGTTCTGAAATTGACTTTATTGAAACAGGTTCAAAAGTTGAACTGCCTTTTTGGCTTGCTCATGAGTTAAAGTTGAGACAAGCAGTATCAGTCAATGTTCCCTCTTGTTTCAATGAAAAAACAAGGTCAGAGATCCAAGCTGATTCTGCGGGTGTGGATCTGAGGTCCAGATGTCCATTTTTTTATGAATTTGGTTGCAAGATAGCACCCATAGTTGACGACCGAAAAATTGGGATTCTGTTGCTGTCTGCATTTAAGAGTAGGTACAAGGAAATTCTCACCAAGGCCCATACTGTAGCATTTGCAGCTGGTTCCAAATTTTGGACTATTCTGACGAAAGAAGAGATCAACTTGTATGAGACAGCTCGATCCGCAATGGCGTCCTTCAAGAAGTGGCGAATGGGCGGGCCAAGATTTCAGATAGCATCTGTTCTAGGAAAAAAGAGAAAATCTACTGCATAG 558 0.4104 MAKYYDIDDIIMEEEAVLSIFKKAASGVGIDPSSEIDFIETGSKVELPFWLAHELKLRQAVSVNVPSCFNEKTRSEIQADSAGVDLRSRCPFFYEFGCKIAPIVDDRKIGILLLSAFKSRYKEILTKAHTVAFAAGSKFWTILTKEEINLYETARSAMASFKKWRMGGPRFQIASVLGKKRKSTA 185
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca01g00300 185 CDD GINS_A_psf3 61 167 - -
Cca01g00300 185 PANTHER UNCHARACTERIZED 1 184 IPR010492 -
Cca01g00300 185 Gene3D - 1 167 IPR038437 -
Cca01g00300 185 SUPERFAMILY GINS helical bundle-like 65 166 IPR036224 -
Cca01g00300 185 SUPERFAMILY PriA/YqbF domain 2 66 - -
Cca01g00300 185 Pfam GINS complex protein 45 148 IPR021151 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca01g00300 1 184 Core DNA Replication Machinery Family AT3G55490 66.304 1.63e-92 266
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca01g00300 K10734 - gmx:100799874 323.168