Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cca01g00289 | ATGGATAGCGATGAATTTGAGAGCTTTGAAATGAGAGTTGATGCAATAACAAGTTATAGTTGGAGAGTAGATAGTATGATAAGGAGTGAGACTGCGTCAAATTTGGGAGAATCCCCTCTTCCTAGTTTTGATTCCCGAGTTGACAGAGCCATAAGGAGTAGGACTCCATCGTCAATGTCAAATTTTGAATCATCCCCTCTCCATACTTTTCCACGATTATTCACCCTGCGTGAGCTTAAAGAAGCCACCAACAATTTCTCAGTTGGGAACAAGATTGGTGTTGGAAGCTTTGGTGATGTCTACAGAGGCAAACTCTTTGATGGTGGTGAGGTGGCAATCAAAAGTGATGGTTTCTGGTCAAAGGGTCTAAATAACTCTGAATTGGCCAGCTGGTCCCGTCTACCACCCCACAAGCACTTGGTTGGGGTAGTTGGGCTCTGTCAAGAGAATGGTGAGAGGTTCTTGGTGTATGAGTACATGAAGAATGCGTCCTTGTATGATCAATTGCATGACAAGCATAGCAGTGTGTTTAATTCGTGGAAAATGAGGATCAAAATTGCTTTGGATGCTTCCCGGGGAATACAACATGTTCAAAACTATGCGGTTCCATATGTTCACAGAGGAGTAATGAAGTCTTCCAACATTCTTCTTGACGCCAGTTGGACGGCGAAAGTGTCTGATTTTAGAATGACGTTTATGAAGAACACAACGGGATGTGATGAATGCATTGATCCCGAGTACGATGGTGTAAATGAGTTGACAGAAAAGAGGGATGTATATGGGTTTGGAGTTGTACTGCTTGAACTTTTAACCGGAAGGAGACCTAAATTCAACTCTCACTTACGTGGAGAGACCTTTTTAAGAATGGTGGGCGTTGCAAAGCCTGATATTTTGCTTAAAGATTTGAGGAAGTTTTGGGCTAAAGATTGGATGAAAATTTTGGATTCAAAGGTTGGAACACCGGATGTGAATGAAGCACGGGCACTGATGTTAATGGCTAATACCGCTATCGATTGTTTGAGTCGGAAAACACTAACCATGGATGCTATTGTGAAGAATTTGGAGCAGGCTCTGGCTATTTGTGCATGA | 1089 | 0.4252 | MDSDEFESFEMRVDAITSYSWRVDSMIRSETASNLGESPLPSFDSRVDRAIRSRTPSSMSNFESSPLHTFPRLFTLRELKEATNNFSVGNKIGVGSFGDVYRGKLFDGGEVAIKSDGFWSKGLNNSELASWSRLPPHKHLVGVVGLCQENGERFLVYEYMKNASLYDQLHDKHSSVFNSWKMRIKIALDASRGIQHVQNYAVPYVHRGVMKSSNILLDASWTAKVSDFRMTFMKNTTGCDECIDPEYDGVNELTEKRDVYGFGVVLLELLTGRRPKFNSHLRGETFLRMVGVAKPDILLKDLRKFWAKDWMKILDSKVGTPDVNEARALMLMANTAIDCLSRKTLTMDAIVKNLEQALAICA | 362 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cca01g00289 | 362 | SUPERFAMILY | Protein kinase-like (PK-like) | 58 | 343 | IPR011009 | - | |
Cca01g00289 | 362 | PANTHER | SERINE/THREONINE-PROTEIN KINASE-LIKE PROTEIN CCR4 | 72 | 361 | IPR044815 | GO:0004674 | |
Cca01g00289 | 362 | PANTHER | SERINE/THREONINE-KINASE CCR4-LIKE PROTEIN | 72 | 361 | - | - | |
Cca01g00289 | 362 | ProSiteProfiles | Protein kinase domain profile. | 86 | 330 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cca01g00289 | 362 | Gene3D | Phosphorylase Kinase; domain 1 | 44 | 159 | - | - | |
Cca01g00289 | 362 | Pfam | Protein tyrosine and serine/threonine kinase | 88 | 276 | IPR001245 | GO:0004672|GO:0006468 | |
Cca01g00289 | 362 | Gene3D | Transferase(Phosphotransferase) domain 1 | 160 | 360 | - | - | |
Cca01g00289 | 362 | ProSitePatterns | Protein kinases ATP-binding region signature. | 92 | 114 | IPR017441 | GO:0005524 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Cca01g00289 | Cca-Chr1 | 3070265 | 3071435 | Dispersed/Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Cca01g00289 | 74 | 362 | Receptor kinase-like Gene Family | AT3G55950 | 48.308 | 4.26e-70 | 232 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_CR4L | Cca01g00289 | PK_Tyr_Ser-Thr | 2.8e-23 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cca01g00289 | - | - | ccaj:109802924 | 631.713 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Cca01g00289 | 01 | 3070265 | 3071435 | Cca05g01600 | 05 | 35297315 | 35299696 | PCT |