Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca01g00254 ATGGACGTACTCATGACATTGAAAGCAGCGAAAAGTACTTGGCGACTAGGAGTAGTGCCCTTCCTTGCTTCATTCACTGCTATGTTCATACTCCTATCAATGCATTATAATCCATATAACATTCCCCCAGAAAACATAAAACTCGCACGTGTCTCGATAAGCATTTTAATGGCAATAAGCAACTTCCCCGTGGTGTCTGATGCAATGATCGAACTCAACCTCATAGCTACGGAACTAGGGCAAATGGCTCTCTCTTCCGCCATGATCAACGACCACATCCTGTGGTTGTTTTTAGTGTTCCATCGCTTTGCCTCGGAGAAAATACTCAAAGATTCTTTCATATTCTTAGCGAACTGGATGCTGTTCTTGTTCTTCAGCGTTTTCGTTCTGCGACCAGCGATGAATTTGATTATTAGGAGAACCCCGGTGGGGAAACCGGTGAGTGAAGTGTAtgttgtgttgatactggtgggggtgttggtgatgtctggtgttggGGATGCGATAGGTGTAACGTTTCTGATGGGGCCGTTGATGTTCGGTTTGATCATACCGAGTGGACCACCCTTGGGATCAACGCTTGTGGAGAAGAGTGAAGTTCTTGTGATGGAGTTTTTTCTACCTTTCTTTTTCGTGTATATAGGATTCCACACGGACTTGACTGCGCTCAAGGATTGGCACTTGTTTTTTACTCTGCAGAGTGTGTTCATCGTGGGGGACGTCATCAAGTTGCTCGCATGTGTGCTGGTTTCTTTCACGTACAACATTAGGCCCAAACATGGCACTGTGCTTGGCCTCGCCATGAACATCAAGGGCATAACCCAACTCATAGGTTTCGCAATACTCAGAAAAATGAAGATGTTGGATGACGAAACATTCAGTCAACTGGTCTGCTGTGTGGTGTTCATCACCGCGATAGTGACACCCTTGATCAACTATTTGTACAAGCATCGCCCTCGAGCGCACCAAACAGCAACCTTCTACGAAGGCCAAATGAGAACCATCCAAAACGCTTCAAGAAACTCAGAGTTTCGCATCATTTGTTGCGTGCACAACGAAGGAAACGTGCGTGGCGTCACTTCGTTGTTAGAAGCATTAAACCCAGTGCTAGAGAGCCCCATATGCGTCTACGCCATCCACCTCATCGAACTCTTGGGGAAAAGCTCACCGATTCTTCTTCCCATAAACTTCAGACACAATAGAAGATTCCTGTCGGTGAATTACCCTAACACCAACCACATCATGCGTGCCTTCGGAAACTACTCCTTCAACTCGACTGGCCCCGTCACGGTTCTTCCCTACGTCAACGTGGCACCGTACAAGAGCATGCACGACGCCGTTTTCAACCTCGCGGAGGACAAGATGGTGCCTCTCGTCATCGTCCCCTTCCACGAAAACGACAACACTGACCACGTCAGCTACGTGGCATCGTCCGTGCGCAAGATGAATTCTAGTTTTCAAGCGCACGTGCCATGCACGTTGGGGATACTCGTGGACAGGTACTCGCGGCTCGGCGCCACCAAAAACCCTAACGTGTTCTTCAACGTGGGCGTGTTCTTCTTGGGTGGACCCGACGACAGGGAAGCCTTGGCGTTGGGGATTCGAATGTCGGAGCGAGTGAACACGAGGGTGGCGTTGTTTAGGTTTATCATGAACGAGAAAGAAAGTGGTGAATCGTTGTTTGAACCGAGTAGGGAACAGTGTGAGGAGAAAGAGGATGACCTAATGTTGGACGAGGGTTTAGTTGATGAGTTCAAGAACATGAAGTATAGGGATTGTTATGCTTCTTGTTATGAGATTATGGTGAATGATGGAATAGAGGTGTTGGATGCAGTGCGAAGATTGGAGGGAGATTATGACCTAGTGATGGTGGGGAGGCGCCATACGATAGGGTTGAATGGAGAGGATATGGCGAGTTTCATAGAGAATGCTGGGGTTTTGGGAATATTGGGGGATATGTTGTCGTCAACGGATTTTTGTATTGGGGTCGTTCCGGTTTTGGTCACACAGTGTGGTGGGATGATACTAAATAGTACTAAGCTCGATAGATTAGGTTCAGCTAATGCCTCTCAAAGAAGTTTCAATATAACCGTGTAA 2097 0.4635 MDVLMTLKAAKSTWRLGVVPFLASFTAMFILLSMHYNPYNIPPENIKLARVSISILMAISNFPVVSDAMIELNLIATELGQMALSSAMINDHILWLFLVFHRFASEKILKDSFIFLANWMLFLFFSVFVLRPAMNLIIRRTPVGKPVSEVYVVLILVGVLVMSGVGDAIGVTFLMGPLMFGLIIPSGPPLGSTLVEKSEVLVMEFFLPFFFVYIGFHTDLTALKDWHLFFTLQSVFIVGDVIKLLACVLVSFTYNIRPKHGTVLGLAMNIKGITQLIGFAILRKMKMLDDETFSQLVCCVVFITAIVTPLINYLYKHRPRAHQTATFYEGQMRTIQNASRNSEFRIICCVHNEGNVRGVTSLLEALNPVLESPICVYAIHLIELLGKSSPILLPINFRHNRRFLSVNYPNTNHIMRAFGNYSFNSTGPVTVLPYVNVAPYKSMHDAVFNLAEDKMVPLVIVPFHENDNTDHVSYVASSVRKMNSSFQAHVPCTLGILVDRYSRLGATKNPNVFFNVGVFFLGGPDDREALALGIRMSERVNTRVALFRFIMNEKESGESLFEPSREQCEEKEDDLMLDEGLVDEFKNMKYRDCYASCYEIMVNDGIEVLDAVRRLEGDYDLVMVGRRHTIGLNGEDMASFIENAGVLGILGDMLSSTDFCIGVVPVLVTQCGGMILNSTKLDRLGSANASQRSFNITV 698
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca01g00254 698 PANTHER CATION/H+ EXCHANGER 3 1 685 - -
Cca01g00254 698 Pfam Sodium/hydrogen exchanger family 23 310 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
Cca01g00254 698 PANTHER CATION/H + ANTIPORTER 1 685 - -
Cca01g00254 698 Gene3D - 1 325 IPR038770 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca01g00254 Cca-Chr1 2631282 2635229 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca01g00254 1 682 Antiporter Super Family AT2G13620 33.659 5.25e-115 363
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca01g00254 - - gmx:106794183 949.888