Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca01g00236 ATGGATTGCTGTGTGTGTACAACTATGCCAATGATTTTGAGGCCTCCAAGGAACACAATATGTGGGGCTTGTTACGAAGGAGTAAGGAGCATAATCAACATGATGAACAATGTTGATAGTGAGAAAGTAAAAGCAATTGCTAATAATCCAAACAGTTCCCCACTTTCACGGCGAAATTCGAGTAAGACACTAGATGATTGTATAAGATGGTGTTCAGAGCAGATAGAGCAATTTAATCAACAAAAAGAAGACCTGGTTTTCCTAAGAAGCTTTGTTGCTGCCTTCAAATCACAGATTCACACGGATATATTGGTCAGTCCAGGCAAACACGGTCCACCTATACCAGCACATAAATCCGTTTTGGCAGCAAGGTCAGAAATATTGAAGAACATGTTAGAGTGCGATGAATGCAAGGCTGCACCAAAGAGCAGCATAAGCATACCCGATTTGAACCACGAAGAGCTAGAGTCTCTGCTGGAGTTTCTGTACAGTGGGACCTTGGGTGTGGAAAAACTAGAGAAGCACGTTTACGCGTTGTCGCAAGCAGGTGATAAGTATGTAATCCCACATTTGCTGAAACACTGCGAACGATACCTGCTGAGTTCGCTAAATACCACTAATGCCCTTGAGACACTGGAGATTGCAGATACTTGTTCCAACCAAAATTTGAAAGAGACAACGTTGAATTTCTTGGTTAAAAACATTGAGCACATGGTGTCTTCTCCTAAGTTTGAAGCTTTTGTGCATAGGAGTCCTCATCTTACTGTGCAACTCGTTACGAGGGCCTTCGTCAATGGTGCCAAATAA 807 0.4238 MDCCVCTTMPMILRPPRNTICGACYEGVRSIINMMNNVDSEKVKAIANNPNSSPLSRRNSSKTLDDCIRWCSEQIEQFNQQKEDLVFLRSFVAAFKSQIHTDILVSPGKHGPPIPAHKSVLAARSEILKNMLECDECKAAPKSSISIPDLNHEELESLLEFLYSGTLGVEKLEKHVYALSQAGDKYVIPHLLKHCERYLLSSLNTTNALETLEIADTCSNQNLKETTLNFLVKNIEHMVSSPKFEAFVHRSPHLTVQLVTRAFVNGAK 268
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca01g00236 268 PANTHER BTB/POZ DOMAIN CONTAINING PROTEIN, EXPRESSED 1 267 - -
Cca01g00236 268 PANTHER BTB/POZ DOMAIN CONTAINING PROTEIN, EXPRESSED-RELATED 1 267 IPR044784 -
Cca01g00236 268 SMART BTB_4 101 203 IPR000210 GO:0005515
Cca01g00236 268 Pfam BTB/POZ domain 95 202 IPR000210 GO:0005515
Cca01g00236 268 Gene3D - 204 266 - -
Cca01g00236 268 ProSiteProfiles BTB domain profile. 101 171 IPR000210 GO:0005515
Cca01g00236 268 SUPERFAMILY POZ domain 87 201 IPR011333 -
Cca01g00236 268 Gene3D Potassium Channel Kv1.1; Chain A 70 203 IPR011333 -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TRAF Cca01g00236 BTB 9.8e-20 CL0033
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca01g00236 K10523 - gmx:100777561 491.115