Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca01g00209 ATGGCTTCTTCAGCTATGGAAACCTGCAAATCATTGGAAAATGATATGCACATGCAGGTGGACATTGAGAAGAATCCGCAGGAGCAGGATGTAAGGTCTCAGTGGGTTCTTAACGCTCCTGAGCCCCCAAGTCCATGCCGTGTGGTTGCAGATTCTCTCAGGAAAACCATTTCTCACTTTCAACAAAAGTTTTCCTCTCTCACTGATCAACCCTGCACCACACTCCTCCTTTCACTTCTGCAGCTGATTTTTCCTATATTTTCTTGGGGCAGAAACTACACTGCTACCAAGTTCAGGAAAGATCTTCTTGCAGGCCTCACTATTGCTAGTCTCTGTATTCCCCAGAGCATTGGTTATGCCACCTTAGCACATCTTGATCCTCAATATGGACTTTATACAAGTGTGGTACCACCGCTTATCTATGCTGTAATGGGAACTTCAAGAGAAATAGCAATTGGTCCTGTAGCTGTGGTTTCTCTGCTGTTATCATCAATGGTTCAGAAATTAATAGACCCTGCAGCTGATCCAGTGGGTTATACAAAGCTCATTTTGCTTGCAACTCTCCTTGCTGGTATCTTTCAAGCTTCATTCGGACTCTTCAGGTTGGGGTTCCTTGTGGATTTCCTATCCCATGCTGCAATAGTTGGATTTGTGGCAGGAGCAGCCATTGTGATTGGGCTTCAGCAGTTGAAAGGACTCTTAGGAATCACCCATTTTACCACCAAAACCGACATAGTCTCTGTCATCAAAGCTGTCTGGGAAGCAGTTCATAATCCTTGGAACCCTCGAAATTTGATCCTCGGATGCTCGTTCTTGGTCTTCATCCTAACGACGAAATTTCTGGGTAAAAGGAAGAAGAAGTTGTTCTGGTTGGCATCAATCGCTCCTCTTGTATCTGTTATTCTGTCAACTCTAATTGTGTTTTTGACAAGAGCTGATAAAAATGGAGTTAAAATTGTGAAACATGTGAAAGGGGGATTGAATCCAAGCTCCATCCATCAGTTAGACTTCAATAACCCCTACATTGGAGAAGTGGCTAAAATTGCACTAGTGGTTGCTGTCGTTGCCCTCACTGAATCCATTGCTGTTGGACGATCTTTTGCATCCATCAAAGGATACCAACTTGATGGAAACAAGGAGATGATGTCAATAGGTTTCACAAACATCATAGGATCTTTTACCTCCTGCTACGTTGCAACTGGTTCGTTCTCCCGCACTGCGGTTAATTATGCTGCTGGGTGTGAAACTTTAGTGTCAAACATTGTGATGGGCATCACAGTGTTGATCTCATTGCAGTTTTTGACAAAGCTCTTGTATTATACTCCAACAGCTATTCTTGCTTCTGTCATCCTCTCTGCTCTTCCAGGACTCATTGATGTCTCTGAAGCTTACAAAATTTGGAAGGTTGATAAGATCGACTTTCTTGCTTGCATTGGTGCCTTCTTTGGAGTACTGTTTGCTTCTGTGGAAATTGGTCTGCTAGTGGCGGTGGTGATATCTTTTTCAAAGATCATTCTGATATCAATTCGACCTGGCACAGAAACTCTAGGAAAACTTCCAGGAACTGATTTGTTCTGCGATGTGTATCAGTATCCTATGGCTGTTAAGATTCCTGGTGTTATGATAATACGAGTCAAGTCTGCGTTGCTTTGCTTTGCAAATGCCAGTTTCGTTAGAGAAAGGATCATCAAATGGGTGACTGAGGAAGAGTCAGAAGATGACAAGGGAAATTCAAGAAGCACCATTCAACTCGTAATTCTTGACACCTCCAATTTGGTGAACATTGACACCTCTGGTATTGCTTCTCTAGAGGAACTGCATAAGAGTTTGTCTTCACGTGGAAAACAGTTAGCGATTGCGAACCCTAGGTGGCAAGTCATACACAAACTAAAGGTGTCCAACTTTGTTGGCAAAATCGGTGGCAGAGTCTTTCTCACTGTTCAAGAAGCTATTGCCTGCAAGACCCGCTGCTAA 1974 0.4321 MASSAMETCKSLENDMHMQVDIEKNPQEQDVRSQWVLNAPEPPSPCRVVADSLRKTISHFQQKFSSLTDQPCTTLLLSLLQLIFPIFSWGRNYTATKFRKDLLAGLTIASLCIPQSIGYATLAHLDPQYGLYTSVVPPLIYAVMGTSREIAIGPVAVVSLLLSSMVQKLIDPAADPVGYTKLILLATLLAGIFQASFGLFRLGFLVDFLSHAAIVGFVAGAAIVIGLQQLKGLLGITHFTTKTDIVSVIKAVWEAVHNPWNPRNLILGCSFLVFILTTKFLGKRKKKLFWLASIAPLVSVILSTLIVFLTRADKNGVKIVKHVKGGLNPSSIHQLDFNNPYIGEVAKIALVVAVVALTESIAVGRSFASIKGYQLDGNKEMMSIGFTNIIGSFTSCYVATGSFSRTAVNYAAGCETLVSNIVMGITVLISLQFLTKLLYYTPTAILASVILSALPGLIDVSEAYKIWKVDKIDFLACIGAFFGVLFASVEIGLLVAVVISFSKIILISIRPGTETLGKLPGTDLFCDVYQYPMAVKIPGVMIIRVKSALLCFANASFVRERIIKWVTEEESEDDKGNSRSTIQLVILDTSNLVNIDTSGIASLEELHKSLSSRGKQLAIANPRWQVIHKLKVSNFVGKIGGRVFLTVQEAIACKTRC 657
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca01g00209 657 PANTHER SULFATE TRANSPORTER 2.1 54 654 - -
Cca01g00209 657 CDD STAS_SulP_like_sulfate_transporter 531 645 - -
Cca01g00209 657 Gene3D STAS domain 510 656 IPR036513 -
Cca01g00209 657 ProSiteProfiles STAS domain profile. 550 654 IPR002645 -
Cca01g00209 657 ProSitePatterns SLC26A transporters signature. 127 148 IPR018045 GO:0008271|GO:0008272
Cca01g00209 657 Pfam STAS domain 531 650 IPR002645 -
Cca01g00209 657 SUPERFAMILY SpoIIaa-like 535 652 IPR036513 -
Cca01g00209 657 TIGRFAM sulP: sulfate permease 85 648 IPR001902 GO:0015301|GO:0016020|GO:0055085
Cca01g00209 657 PANTHER SULFATE TRANSPORTER 54 654 IPR001902 GO:0015301|GO:0016020|GO:0055085
Cca01g00209 657 Pfam Sulfate permease family 98 478 IPR011547 GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca01g00209 Cca-Chr1 2173574 2180416 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca01g00209 27 653 Inorganic Solute Cotransporters AT5G10180 69.634 0.0 899
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca01g00209 K17469 - gmx:100781327 1156.74