Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca01g00164 ATGGGTCTGTCGAATTTCCCTAGTGCATCAGAAGGGGTGCTACCCGTGCTCGTCATGAACACCGTTGTATCGGTGGCTGTGTTGAAGAACATGTTCAGGTCCATGCTCCAAGTGGTTGCTGGCACTGGCACTGGCACTACTTCTTCCTCCTACTCTCCCAACATTCAACAAGACTGCTCCTGCTCCCACCCAAGAAGGGTCTCCATAACTCACTACGACTCATTGTGCCACGCTGTGCCCTTGGTCGAGTGCTGCGTTTGTCTCTCTGCCTTTGAGGCTAATCAAGAGTGTGGTAGGTGA 300 0.5267 MGLSNFPSASEGVLPVLVMNTVVSVAVLKNMFRSMLQVVAGTGTGTTSSSYSPNIQQDCSCSHPRRVSITHYDSLCHAVPLVECCVCLSAFEANQECGR 99
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca01g00164 99 PANTHER - 1 97 IPR044249 -
Cca01g00164 99 PANTHER F21J9.24-RELATED 1 97 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca01g00164 Cca-Chr1 1597904 1598932 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca01g00164 1 99 C3H Transcription Factor Family AT2G04240 28.814 1.37e-06 42.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca01g00164 K16285 - gmx:100811790 112.849