Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cca01g00132 | ATGGGTTTATGTTCTCCTTTTCTTGTTACACTTCTTCTGCTAACATCATATGCGCTTTGTCAACTTGAAGAATTTATCAGTATTGACTGTGGAGGGACAAGTAACTACACGGATAAGAGCACAGGGCTTGCATGGATATCGGACTCTGGGATTATGAAACATGGCAAGCCAGTGGAGGTACAAAATCCTAGTGGAAACAAGGTTCAGTATCAGAGACGCAGAGACTTTCCTATAGACAACAGAAAATACTGTTATACACTTGGCACTGAGGAGAGAAGAAGGTATCTAGTGAGAGCAACGTTTCAGTATGGTAGCTTGGATGATGGAGACACATATCCTCAGTTTCAGCTCTATTTGGATGCAACAAAATGGGCTACTGTGTCAATATATGATGCCTCAAGAATTTATGTGAAGGAAATGATCTTCAGGGCACCCTCAAACTCTGTTGATGTTTGCATGTGCTGTGCCACCACTGGCTCTCCCTTCATATCTACCCTTGAGCTGAGGCCCTTGAATCTTTCTATGTATGCCACAGATTTTGAGGGCAGTTTCTTCTTGAAAGTGGCTGCAAGAATTAACTTTGGTGCTCCAAGTGAGGATGCTGTCAGGTATCCAGATGACCCATATGATAGAATTTGGGAGTCTGATCTTGTTAAAAGACAAAATTATCTTGTTGGGGTGGCACCAGGCACCGAAAGAATTAACACAACAAAGAAAATAGAAATAAAGACAAGGGAATACCCACCTGTTAAAGTGATGCAAACTGCAGTTGTTGGCACAAAAGGGTTGATTAGCTATAGACTAAACCTGGAAGACTTCCCTGGCAATGCTAGAGCTTATGCATATTTGGCAGAGATTGAAGATCTTCCCAAGAATGAGACTAGAAAATTCAAGTTGGAGCAACCTTACATAGCTGACTATAGCAATGCAGTGGTGAACATAGCTGAGAATGCCAATGGGAGCTACACTCTTTATGAACCAAGTTACATGAATGTGAGTCTGGAATTTGTGCTTTCATTTTCCTTTGTTAAGACCCGGGATTCCACTCGAGGACCTCTTCTTAATGCAATGGAAATAAGCAAATATGTGCAAATTGCTTCAAAGACTGACAAGCAAGATTCAAATTTTGTGAATGTATTTCGCTTCTTATCCACTGAAAGTGTCCTGAAGAATGAAGGTGATCCTTGTGTTCCAACTCCCTGGGAATGGGTGAATTGTAGTACAGCTACACCTCCAAGAATCACAAAGATAAACTTGTCAAGAAGGAATATGAAGGGTGAAATACCACGGGAGCTCAACAACATGGAAGCATTGACAGAACTGTGGTTAGATGGCAACTTGCTTACAGGACAACTTCCTGACATGAGCAATCTTATCAATCTAAAGATTGTGCATCTAGAGAACAACAAGTTGACTGGTCCATTACCATCTTACTTGGGTAGTTTGCCAAGTTTACAAGCATTGTTCATACAGAATAACTCGTTTAGTGGGGAAATACCATCAGGATTACTGTCAGGAAAAATAATTTTCAACTTTGATGATAATCCTGAACTACATAAAGGGAACAAGAAGCATTTTCATTTGATGCTAGGAATTTCTGTTGGAGTACTAGTGGTTCTATTAATATTGTTCTTAACAAGTTTGGTGCTATTGCTTAATCTGCGGAGAAAGGCATCTCAGCAGAAACGTGACGAGAAGGGTGTATCTGGACGCAGCAGCACTAGACCTTTAACTGGATACTCATTTGGTCGGGGTGGGAATTTAATGGACGAAGGTACTGCTTACTATATTACTCTCTCAGAGTTGAAAGAAGCTACTAATGATTTTTCAAGGAACATTGGAAAAGGAAGTTTTGGATCCGTCTACTATGGAAAAATGAAAGATGGAAAAGAGGTGGCAGTTAAGACTATGACTGATCCATCCAGCTATGGGAACCAGCAATTTGTAAATGAGGTAGCCCTCTTATCAAGAAttcatcacagaaacttggttcctctaattggatattgtgaagaagaatatcagcatattctggtttatgagtacatgcacaatggcactttaagggagtacattcatgAATGTTCAAATCAGAAGCAATTAGATTGGTTAGCTCGCCTTCGAATTGCAGAAGATGCAGCCAAAGGTCTTGAATACTTGCACACAGGATGCAATCCTAGTatcattcaccgtgacgtgaagacaagtaatattctcctagatatcaatatgagagcaaaagtgtcagattttggactctcaaggttagctgaggaagatttaactcacatatcaagtgttgcaaggggaactgtaggttacctggatcctgaGTACTATGCAAATCAGCAATTGACTGAAAAAAGTGATGTATACAGTTTTGGAGTTGTTCTGCTGGAATTGATATCAGGAAAAAAGCCTGTATCATCAGAAGACTATGGTCCCGAAATGAATATTGTTCACTGGGTATCTTAG | 2475 | 0.3612 | MGLCSPFLVTLLLLTSYALCQLEEFISIDCGGTSNYTDKSTGLAWISDSGIMKHGKPVEVQNPSGNKVQYQRRRDFPIDNRKYCYTLGTEERRRYLVRATFQYGSLDDGDTYPQFQLYLDATKWATVSIYDASRIYVKEMIFRAPSNSVDVCMCCATTGSPFISTLELRPLNLSMYATDFEGSFFLKVAARINFGAPSEDAVRYPDDPYDRIWESDLVKRQNYLVGVAPGTERINTTKKIEIKTREYPPVKVMQTAVVGTKGLISYRLNLEDFPGNARAYAYLAEIEDLPKNETRKFKLEQPYIADYSNAVVNIAENANGSYTLYEPSYMNVSLEFVLSFSFVKTRDSTRGPLLNAMEISKYVQIASKTDKQDSNFVNVFRFLSTESVLKNEGDPCVPTPWEWVNCSTATPPRITKINLSRRNMKGEIPRELNNMEALTELWLDGNLLTGQLPDMSNLINLKIVHLENNKLTGPLPSYLGSLPSLQALFIQNNSFSGEIPSGLLSGKIIFNFDDNPELHKGNKKHFHLMLGISVGVLVVLLILFLTSLVLLLNLRRKASQQKRDEKGVSGRSSTRPLTGYSFGRGGNLMDEGTAYYITLSELKEATNDFSRNIGKGSFGSVYYGKMKDGKEVAVKTMTDPSSYGNQQFVNEVALLSRIHHRNLVPLIGYCEEEYQHILVYEYMHNGTLREYIHECSNQKQLDWLARLRIAEDAAKGLEYLHTGCNPSIIHRDVKTSNILLDINMRAKVSDFGLSRLAEEDLTHISSVARGTVGYLDPEYYANQQLTEKSDVYSFGVVLLELISGKKPVSSEDYGPEMNIVHWVS | 824 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cca01g00132 | 824 | Pfam | Malectin-like domain | 28 | 361 | IPR024788 | - | |
Cca01g00132 | 824 | SUPERFAMILY | Protein kinase-like (PK-like) | 592 | 813 | IPR011009 | - | |
Cca01g00132 | 824 | Gene3D | Phosphorylase Kinase; domain 1 | 586 | 682 | - | - | |
Cca01g00132 | 824 | ProSitePatterns | Protein kinases ATP-binding region signature. | 613 | 635 | IPR017441 | GO:0005524 | |
Cca01g00132 | 824 | PANTHER | OS07G0107800 PROTEIN-RELATED | 13 | 822 | - | - | |
Cca01g00132 | 824 | SMART | serkin_6 | 607 | 823 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cca01g00132 | 824 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 728 | 740 | IPR008271 | GO:0004672|GO:0006468 | |
Cca01g00132 | 824 | PANTHER | - | 13 | 822 | - | - | |
Cca01g00132 | 824 | Pfam | Protein tyrosine and serine/threonine kinase | 609 | 809 | IPR001245 | GO:0004672|GO:0006468 | |
Cca01g00132 | 824 | Gene3D | Ribonuclease Inhibitor | 367 | 520 | IPR032675 | - | |
Cca01g00132 | 824 | SUPERFAMILY | L domain-like | 398 | 517 | - | - | |
Cca01g00132 | 824 | ProSiteProfiles | Protein kinase domain profile. | 607 | 824 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cca01g00132 | 824 | Gene3D | Transferase(Phosphotransferase) domain 1 | 683 | 824 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Cca01g00132 | Cca-Chr1 | 1294242 | 1301032 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Cca01g00132 | 1 | 823 | Receptor kinase-like Gene Family | AT1G67720 | 69.613 | 0.0 | 1189 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_LRR-I-1 | Cca01g00132 | Malectin_like | 3e-89 | CL0202 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cca01g00132 | - | - | gmx:100807148 | 1530.38 |